Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485916

Identifier: 103485916

GI number: 103485916

Start: 429651

End: 430079

Strand: Reverse

Name: 103485916

Synonym: Sala_0423

Alternate gene names: NA

Gene position: 430079-429651 (Counterclockwise)

Preceding gene: 103485917

Following gene: 103485915

Centisome position: 12.86

GC content: 63.87

Gene sequence:

>429_bases
ATGGCCCATTGCTATTACCACGCCCTCTCGTCGGTCCGGAAATGGGGCGGCAGGGTCGATGACTATCTCCCGCTGCACCA
GTGGTTCGACCAGTCCAAGGCAATCCTGGCAGACCCTCGGCACCGCGCGCTGCGGCACCATGCCGAGGGGATATTCATGC
TCGAAACCTTGTTCGGCGAGACCCTCGTCAATGCTGATGGCCGGGTCGTTCCGGTGCGTCTGGTCGGCGAACAGCACGTA
CGCGAAGACCTGGGGTCGATCCCCTCCTTTGCGGACTGGGCGCGCTTGATCACGCCGCAGGCCTGGATGCTGCGAGGCAA
CCCTCTGGACGGCGCTGAAGGGGTGACGATCGATATGCCTGTCCCCGGCGAAGCAGTTGCGTCCAGGACCAGGCCACCTG
CTGGAGGAGAGGTCCGTACCGTGATCTAG

Upstream 100 bases:

>100_bases
GAACTGGTGATCGATGTGGCTGAAGCGACCTTCGTGCTCGACTGCAGCCTGCGCTTCATCGCTACCGATGATCACTCGAC
CGAGCTCTAGGAGACTTGGC

Downstream 100 bases:

>100_bases
GAAGGGGTTCTCCGGTGGAGGGCTGGCGGGGGAATGATTCGGCCAAGAACGGAGGGAACCGAGGCAGGGCAAACCTGTTC
AAGGCATCCAGCTCCACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MAHCYYHALSSVRKWGGRVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGETLVNADGRVVPVRLVGEQHV
REDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMPVPGEAVASRTRPPAGGEVRTVI

Sequences:

>Translated_142_residues
MAHCYYHALSSVRKWGGRVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGETLVNADGRVVPVRLVGEQHV
REDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMPVPGEAVASRTRPPAGGEVRTVI
>Mature_141_residues
AHCYYHALSSVRKWGGRVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGETLVNADGRVVPVRLVGEQHVR
EDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMPVPGEAVASRTRPPAGGEVRTVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15801; Mature: 15670

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHCYYHALSSVRKWGGRVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGE
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
TLVNADGRVVPVRLVGEQHVREDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMP
HHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEECC
VPGEAVASRTRPPAGGEVRTVI
CCCHHHHHCCCCCCCCCEEECC
>Mature Secondary Structure 
AHCYYHALSSVRKWGGRVDDYLPLHQWFDQSKAILADPRHRALRHHAEGIFMLETLFGE
CHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
TLVNADGRVVPVRLVGEQHVREDLGSIPSFADWARLITPQAWMLRGNPLDGAEGVTIDMP
HHCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEECC
VPGEAVASRTRPPAGGEVRTVI
CCCHHHHHCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA