Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485829

Identifier: 103485829

GI number: 103485829

Start: 339108

End: 339512

Strand: Reverse

Name: 103485829

Synonym: Sala_0334

Alternate gene names: NA

Gene position: 339512-339108 (Counterclockwise)

Preceding gene: 103485830

Following gene: 103485828

Centisome position: 10.15

GC content: 67.65

Gene sequence:

>405_bases
GTGACCGACCGCACCCGCCACCCATCCTGCCGCTGCGGGCAGGTGCGCATCGCCTGCACCGGCGAGCCGATCCGCGTGTC
GGTGTGCCATTGCCGCGAGTGCAAGGCGCGCAGCGGCAGCGCCTTTGCCGCGCAGGTCCGTTTCCCCGCCGAACAGGTCC
GCACCGAGGGCGAGGCGAAGCTGTGGCAATATACTGGCGACAGCGGCCACACCGCCGACTTCTTCTTTTGCCCGACCTGT
GGGTCGGGCGTCTGGTACCGCGCGCGGCCCCATCACGACGCCTATGCGATCCCGCTCGGCAATTTCGAACCAGGCCACGG
CTTCGCGCCCGAATATTCGGTCTGGGAAGAACGCAGGGAGCCCTGGGTCTCGATCATCGGGGACGGGATCGAGCATCATG
ACTGA

Upstream 100 bases:

>100_bases
CCGGCGAAGCCAGCGCCGCGGTCGCGGCGGCTAATGAGGAATTGGGCGCGGATGCCAGCCTTGATGCACTTGTCCGCGTG
GCGCTCAAGAAAGCGGCGAA

Downstream 100 bases:

>100_bases
GCCTTGCGACCCCCCTGTCCCTCTCCCGTCGGGAGAGGGTTGCGCAGACTTGGCGGCGAAGCCGCTTAGTCGAAGCTGGG
TGAGGGGATCATCGGCGGCC

Product: glutathione-dependent formaldehyde-activating, GFA

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Lipoprotein

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTDRTRHPSCRCGQVRIACTGEPIRVSVCHCRECKARSGSAFAAQVRFPAEQVRTEGEAKLWQYTGDSGHTADFFFCPTC
GSGVWYRARPHHDAYAIPLGNFEPGHGFAPEYSVWEERREPWVSIIGDGIEHHD

Sequences:

>Translated_134_residues
MTDRTRHPSCRCGQVRIACTGEPIRVSVCHCRECKARSGSAFAAQVRFPAEQVRTEGEAKLWQYTGDSGHTADFFFCPTC
GSGVWYRARPHHDAYAIPLGNFEPGHGFAPEYSVWEERREPWVSIIGDGIEHHD
>Mature_133_residues
TDRTRHPSCRCGQVRIACTGEPIRVSVCHCRECKARSGSAFAAQVRFPAEQVRTEGEAKLWQYTGDSGHTADFFFCPTCG
SGVWYRARPHHDAYAIPLGNFEPGHGFAPEYSVWEERREPWVSIIGDGIEHHD

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15095; Mature: 14964

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRTRHPSCRCGQVRIACTGEPIRVSVCHCRECKARSGSAFAAQVRFPAEQVRTEGEAK
CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEECCHHHHCCCCCCE
LWQYTGDSGHTADFFFCPTCGSGVWYRARPHHDAYAIPLGNFEPGHGFAPEYSVWEERRE
EEEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC
PWVSIIGDGIEHHD
CEEEEECCCCCCCC
>Mature Secondary Structure 
TDRTRHPSCRCGQVRIACTGEPIRVSVCHCRECKARSGSAFAAQVRFPAEQVRTEGEAK
CCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEEECCHHHHCCCCCCE
LWQYTGDSGHTADFFFCPTCGSGVWYRARPHHDAYAIPLGNFEPGHGFAPEYSVWEERRE
EEEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHCC
PWVSIIGDGIEHHD
CEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA