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The map label for this gene is ruvB

Identifier: 103485828

GI number: 103485828

Start: 337887

End: 338903

Strand: Reverse

Name: ruvB

Synonym: Sala_0333

Alternate gene names: 103485828

Gene position: 338903-337887 (Counterclockwise)

Preceding gene: 103485829

Following gene: 103485827

Centisome position: 10.13

GC content: 68.83

Gene sequence:

>1017_bases
GTGACCGACCTCACCACCCCCATCCGCACCCCCGAAGACGCCGACGCCGCGCTGCGCCCGAAAACGCTGGCCGAGTTCGT
CGGCCAGGCGGCGGCGCGCGAGAATCTGCGTATCTTTATCGAGGCGGCGAAGGCGCGCGGCGACGCGCTCGACCATGTGC
TCTTCTTTGGCCCGCCGGGGCTGGGCAAGACGACGCTGGCGCAGATCGTCGCGCGTGAACTTGGCGTCGGCTTCCGCTCG
ACCAGCGGGCCGGTGATCGCCAAGGCGGGCGACCTTGCCGCGCTGCTCACCAATCTAGAGGACGGCGATGTCCTGTTCAT
CGACGAAATCCACCGCCTGTCGCCCGCGGTCGAGGAAATCCTCTATCCCGCGATGGAGGACCGCGCGCTCGACATCATGA
TCGGCGAGGGGCCGTCGGCGCGTTCGGTCCGCATCGACCTCCCCCAATTCACCCTCGTCGGCGCGACTACGCGGCAAGGC
CTGCTGACGACGCCGCTGCGCGATCGCTTCGGCATTCCGGTGCGGCTCAATTTCTATACGCACGCCGAGCTGGAGCAGGT
GATCGGCCGCGCGGCGCGGTTGCTTGGTCTTGCCATCGCGCCCGACGGCGCGCTGGAAATCGCCAAGCGTTCGCGCGGGA
CGCCGCGCATCGCGGGACGGCTGCTGCGCCGCGTGCGCGATTTCGCGGCCGTGGCGGGGCACGCCATCGTCGATGCACGC
GCCGCCGATGCCGCGCTCAACCGGCTGGAGGTCGATGCGCTGGGCCTCGATGCGATGGACCGGCGCTATCTGACGATGAT
CGCCGACATCTATCGCGGCGGTCCGGTCGGGGTGGAAACGCTCGCCGCAGGCCTTTCGGAGCCGCGCGACACGATCGAGG
ATGTGATCGAGCCCTATTTGCTGCAAATCGGGCTGATCGCCCGCACCGCGCGCGGGCGGACGCTCAACGCCAGCGCGTGG
AAACATCTGGGGCTCAATCCACCCGCCGGGTCGCAGGACGGGCTGTTCGACAAATGA

Upstream 100 bases:

>100_bases
TCGGCACCGCCGAGCCCCCTCATCCAACTCCGCCTAGCCGCTTTCAGCGGCAAGGCTGCGTATCCTTCTCCCTCGGAGGG
AGAAGGTATAAGGCAAAACC

Downstream 100 bases:

>100_bases
TCGTCGCCCCCGCGAAGGCGGGGGCCGCTGGAGAATCTTCTCCAACCCGGCTGCGTAAGCCGATAGCGGCCCCCGCCTTC
GCGGGGGCGACGCTATACGG

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTDLTTPIRTPEDADAALRPKTLAEFVGQAAARENLRIFIEAAKARGDALDHVLFFGPPGLGKTTLAQIVARELGVGFRS
TSGPVIAKAGDLAALLTNLEDGDVLFIDEIHRLSPAVEEILYPAMEDRALDIMIGEGPSARSVRIDLPQFTLVGATTRQG
LLTTPLRDRFGIPVRLNFYTHAELEQVIGRAARLLGLAIAPDGALEIAKRSRGTPRIAGRLLRRVRDFAAVAGHAIVDAR
AADAALNRLEVDALGLDAMDRRYLTMIADIYRGGPVGVETLAAGLSEPRDTIEDVIEPYLLQIGLIARTARGRTLNASAW
KHLGLNPPAGSQDGLFDK

Sequences:

>Translated_338_residues
MTDLTTPIRTPEDADAALRPKTLAEFVGQAAARENLRIFIEAAKARGDALDHVLFFGPPGLGKTTLAQIVARELGVGFRS
TSGPVIAKAGDLAALLTNLEDGDVLFIDEIHRLSPAVEEILYPAMEDRALDIMIGEGPSARSVRIDLPQFTLVGATTRQG
LLTTPLRDRFGIPVRLNFYTHAELEQVIGRAARLLGLAIAPDGALEIAKRSRGTPRIAGRLLRRVRDFAAVAGHAIVDAR
AADAALNRLEVDALGLDAMDRRYLTMIADIYRGGPVGVETLAAGLSEPRDTIEDVIEPYLLQIGLIARTARGRTLNASAW
KHLGLNPPAGSQDGLFDK
>Mature_337_residues
TDLTTPIRTPEDADAALRPKTLAEFVGQAAARENLRIFIEAAKARGDALDHVLFFGPPGLGKTTLAQIVARELGVGFRST
SGPVIAKAGDLAALLTNLEDGDVLFIDEIHRLSPAVEEILYPAMEDRALDIMIGEGPSARSVRIDLPQFTLVGATTRQGL
LTTPLRDRFGIPVRLNFYTHAELEQVIGRAARLLGLAIAPDGALEIAKRSRGTPRIAGRLLRRVRDFAAVAGHAIVDARA
ADAALNRLEVDALGLDAMDRRYLTMIADIYRGGPVGVETLAAGLSEPRDTIEDVIEPYLLQIGLIARTARGRTLNASAWK
HLGLNPPAGSQDGLFDK

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family

Homologues:

Organism=Escherichia coli, GI1788167, Length=319, Percent_Identity=64.2633228840125, Blast_Score=412, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVB_SPHAL (Q1GWB6)

Other databases:

- EMBL:   CP000356
- RefSeq:   YP_615389.1
- ProteinModelPortal:   Q1GWB6
- SMR:   Q1GWB6
- GeneID:   4081031
- GenomeReviews:   CP000356_GR
- KEGG:   sal:Sala_0333
- NMPDR:   fig|317655.9.peg.308
- HOGENOM:   HBG339960
- OMA:   EKFDGGP
- ProtClustDB:   PRK00080
- BioCyc:   SALA317655:SALA_0333-MONOMER
- HAMAP:   MF_00016
- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- ProDom:   PD005323
- SMART:   SM00382
- TIGRFAMs:   TIGR00635

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N

EC number: =3.6.4.12

Molecular weight: Translated: 36314; Mature: 36183

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLTTPIRTPEDADAALRPKTLAEFVGQAAARENLRIFIEAAKARGDALDHVLFFGPPG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEHHHCCCHHCEEEEECCCC
LGKTTLAQIVARELGVGFRSTSGPVIAKAGDLAALLTNLEDGDVLFIDEIHRLSPAVEEI
CCHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHH
LYPAMEDRALDIMIGEGPSARSVRIDLPQFTLVGATTRQGLLTTPLRDRFGIPVRLNFYT
HHHHHCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCCCCEECCCHHHCCCCEEEEEEC
HAELEQVIGRAARLLGLAIAPDGALEIAKRSRGTPRIAGRLLRRVRDFAAVAGHAIVDAR
HHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AADAALNRLEVDALGLDAMDRRYLTMIADIYRGGPVGVETLAAGLSEPRDTIEDVIEPYL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
LQIGLIARTARGRTLNASAWKHLGLNPPAGSQDGLFDK
HHHHHHHHHCCCCEECHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDLTTPIRTPEDADAALRPKTLAEFVGQAAARENLRIFIEAAKARGDALDHVLFFGPPG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEHHHCCCHHCEEEEECCCC
LGKTTLAQIVARELGVGFRSTSGPVIAKAGDLAALLTNLEDGDVLFIDEIHRLSPAVEEI
CCHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHH
LYPAMEDRALDIMIGEGPSARSVRIDLPQFTLVGATTRQGLLTTPLRDRFGIPVRLNFYT
HHHHHCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCCCCEECCCHHHCCCCEEEEEEC
HAELEQVIGRAARLLGLAIAPDGALEIAKRSRGTPRIAGRLLRRVRDFAAVAGHAIVDAR
HHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AADAALNRLEVDALGLDAMDRRYLTMIADIYRGGPVGVETLAAGLSEPRDTIEDVIEPYL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
LQIGLIARTARGRTLNASAWKHLGLNPPAGSQDGLFDK
HHHHHHHHHCCCCEECHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA