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The map label for this gene is ybgC [C]

Identifier: 103485827

GI number: 103485827

Start: 337225

End: 337704

Strand: Reverse

Name: ybgC [C]

Synonym: Sala_0332

Alternate gene names: 103485827

Gene position: 337704-337225 (Counterclockwise)

Preceding gene: 103485828

Following gene: 103485826

Centisome position: 10.1

GC content: 62.71

Gene sequence:

>480_bases
ATGGTCAATGCCCCACCCCCCTTCGTCCCCGGCGCCTTTGTCGGGATCGAGCATCATTACCGGGCGCGCGTCTATTTCGA
GGACACCGACCTTTCGGGCATCGTCTATCACGCCAATTATCTGCGCTATATGGAGCGCGCGCGATCGGACATGCTGCGTC
TTGCGGGGATCGATCAGCGCGCGGCGATGGAAGACGGCGAAGGCGCCTGGGCGGTCACCGATCTTTCGATCAAATACCGC
AGCCCCGCAAAGCTCGACGACGATCTGCTCGTCGTCAGCACGGTCGAGGTGGTACGCGGCGCGAGCGTCATCATCGCACA
GCGCATCCTTCGCACAAATGATACGTTAAGCGGCGAGACATTGACCGACGGCAGGGTCACGGCCGCCTTCCTCTCACCCA
CCGGGCGGCCACGGCGCCAGCCCGCGGACTGGGTGCAGCGTTTCACCGCGATCATGAATGGAGACAACATCCCTTGCTAG

Upstream 100 bases:

>100_bases
GGGGGCGACGCTATACGGGCTCCACCAACCGGCCCCCGACTGCGACAAAGCGTTTATCAGGGCTTTGCGGCGAGTCGAAG
CGCGGCTATCGGTCGAAGCG

Downstream 100 bases:

>100_bases
ACAATATCTCGCTGGCCGCCGATGCGGCGACCTTGTCGCCCGTCGCGCTGTTCCTTCAGGCTGACATCATCGTCAAGGCG
GTGATGATCGGCCTGCTCGC

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MVNAPPPFVPGAFVGIEHHYRARVYFEDTDLSGIVYHANYLRYMERARSDMLRLAGIDQRAAMEDGEGAWAVTDLSIKYR
SPAKLDDDLLVVSTVEVVRGASVIIAQRILRTNDTLSGETLTDGRVTAAFLSPTGRPRRQPADWVQRFTAIMNGDNIPC

Sequences:

>Translated_159_residues
MVNAPPPFVPGAFVGIEHHYRARVYFEDTDLSGIVYHANYLRYMERARSDMLRLAGIDQRAAMEDGEGAWAVTDLSIKYR
SPAKLDDDLLVVSTVEVVRGASVIIAQRILRTNDTLSGETLTDGRVTAAFLSPTGRPRRQPADWVQRFTAIMNGDNIPC
>Mature_159_residues
MVNAPPPFVPGAFVGIEHHYRARVYFEDTDLSGIVYHANYLRYMERARSDMLRLAGIDQRAAMEDGEGAWAVTDLSIKYR
SPAKLDDDLLVVSTVEVVRGASVIIAQRILRTNDTLSGETLTDGRVTAAFLSPTGRPRRQPADWVQRFTAIMNGDNIPC

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=127, Percent_Identity=37.7952755905512, Blast_Score=90, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17696; Mature: 17696

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNAPPPFVPGAFVGIEHHYRARVYFEDTDLSGIVYHANYLRYMERARSDMLRLAGIDQR
CCCCCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHH
AAMEDGEGAWAVTDLSIKYRSPAKLDDDLLVVSTVEVVRGASVIIAQRILRTNDTLSGET
HHCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHCCCCCCCCE
LTDGRVTAAFLSPTGRPRRQPADWVQRFTAIMNGDNIPC
ECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVNAPPPFVPGAFVGIEHHYRARVYFEDTDLSGIVYHANYLRYMERARSDMLRLAGIDQR
CCCCCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHH
AAMEDGEGAWAVTDLSIKYRSPAKLDDDLLVVSTVEVVRGASVIIAQRILRTNDTLSGET
HHCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHCCCCCCCCE
LTDGRVTAAFLSPTGRPRRQPADWVQRFTAIMNGDNIPC
ECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]