| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is tolQ [H]
Identifier: 103485826
GI number: 103485826
Start: 336533
End: 337231
Strand: Reverse
Name: tolQ [H]
Synonym: Sala_0331
Alternate gene names: 103485826
Gene position: 337231-336533 (Counterclockwise)
Preceding gene: 103485827
Following gene: 103485825
Centisome position: 10.08
GC content: 65.81
Gene sequence:
>699_bases TTGCTAGACAATATCTCGCTGGCCGCCGATGCGGCGACCTTGTCGCCCGTCGCGCTGTTCCTTCAGGCTGACATCATCGT CAAGGCGGTGATGATCGGCCTGCTCGCCGCCTCCATCTATGTCTGGGCGGTGATCTTCACCCACGGCCGCGGCGTCGGCA AGCTGATGCGCGCGTCGGAGCGGTTCGAGCGCGATTTCTGGCGCGCCGACAATATCGACCGCTTTTTCGACAAGAATGGC GCCGAAGAGCTGCCGAGCGCGAAGGTGCTGAGCGCCGGGATCGGCGAATGGCGGCGTTCGACCAAGGGCAAGGTGATCGA CCGCGACGGCACGCGCGAACGGCTGGGCATTGCGATGAACAGCGCGATTGCAGGAGAGATCGACCGGCTGGCCGAGAAAA TCGGGACGCTCGCCACCATCGGCGCGGTCGCGCCCTTCGTCGGGCTGTTCGGCACCGTCTGGGGCATCATGCGCAGCTTC ACCGCAATCGCGGCGGAGAATAACAGCAGTCTGGCGGTCGTTGCGCCGGGGATCGCCGAGGCGCTGTTCGCGACGGCAAT CGGCCTGTTCGCCGCCATTCCGGCGGTGATCGCCTACAACGCCTTTTCCCAGCGCCTGAATCGCCTCGAATCGCGCCTCG GCCGCTTTGCCGACGGGCTGCACGCGACGTTCAGCCGCGAACTGGAGGTCGAGGCCTGA
Upstream 100 bases:
>100_bases GGGTCACGGCCGCCTTCCTCTCACCCACCGGGCGGCCACGGCGCCAGCCCGCGGACTGGGTGCAGCGTTTCACCGCGATC ATGAATGGAGACAACATCCC
Downstream 100 bases:
>100_bases TGGCGATGACCGGACCTTCGGGCGGCGGCGGTGGACGGCGCGGGCGCGGCCATCGCCGCGCGCCGATGTCGGAGATCAAC GTCACGCCGCTGGTCGACGT
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MLDNISLAADAATLSPVALFLQADIIVKAVMIGLLAASIYVWAVIFTHGRGVGKLMRASERFERDFWRADNIDRFFDKNG AEELPSAKVLSAGIGEWRRSTKGKVIDRDGTRERLGIAMNSAIAGEIDRLAEKIGTLATIGAVAPFVGLFGTVWGIMRSF TAIAAENNSSLAVVAPGIAEALFATAIGLFAAIPAVIAYNAFSQRLNRLESRLGRFADGLHATFSRELEVEA
Sequences:
>Translated_232_residues MLDNISLAADAATLSPVALFLQADIIVKAVMIGLLAASIYVWAVIFTHGRGVGKLMRASERFERDFWRADNIDRFFDKNG AEELPSAKVLSAGIGEWRRSTKGKVIDRDGTRERLGIAMNSAIAGEIDRLAEKIGTLATIGAVAPFVGLFGTVWGIMRSF TAIAAENNSSLAVVAPGIAEALFATAIGLFAAIPAVIAYNAFSQRLNRLESRLGRFADGLHATFSRELEVEA >Mature_232_residues MLDNISLAADAATLSPVALFLQADIIVKAVMIGLLAASIYVWAVIFTHGRGVGKLMRASERFERDFWRADNIDRFFDKNG AEELPSAKVLSAGIGEWRRSTKGKVIDRDGTRERLGIAMNSAIAGEIDRLAEKIGTLATIGAVAPFVGLFGTVWGIMRSF TAIAAENNSSLAVVAPGIAEALFATAIGLFAAIPAVIAYNAFSQRLNRLESRLGRFADGLHATFSRELEVEA
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1789381, Length=222, Percent_Identity=40.990990990991, Blast_Score=144, Evalue=4e-36, Organism=Escherichia coli, GI1786958, Length=212, Percent_Identity=38.6792452830189, Blast_Score=142, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 24900; Mature: 24900
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDNISLAADAATLSPVALFLQADIIVKAVMIGLLAASIYVWAVIFTHGRGVGKLMRASE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RFERDFWRADNIDRFFDKNGAEELPSAKVLSAGIGEWRRSTKGKVIDRDGTRERLGIAMN HHHHHHHCCCCHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH SAIAGEIDRLAEKIGTLATIGAVAPFVGLFGTVWGIMRSFTAIAAENNSSLAVVAPGIAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHH ALFATAIGLFAAIPAVIAYNAFSQRLNRLESRLGRFADGLHATFSRELEVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLDNISLAADAATLSPVALFLQADIIVKAVMIGLLAASIYVWAVIFTHGRGVGKLMRASE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RFERDFWRADNIDRFFDKNGAEELPSAKVLSAGIGEWRRSTKGKVIDRDGTRERLGIAMN HHHHHHHCCCCHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH SAIAGEIDRLAEKIGTLATIGAVAPFVGLFGTVWGIMRSFTAIAAENNSSLAVVAPGIAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHH ALFATAIGLFAAIPAVIAYNAFSQRLNRLESRLGRFADGLHATFSRELEVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]