Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485769

Identifier: 103485769

GI number: 103485769

Start: 271719

End: 272333

Strand: Reverse

Name: 103485769

Synonym: Sala_0274

Alternate gene names: NA

Gene position: 272333-271719 (Counterclockwise)

Preceding gene: 103485770

Following gene: 103485768

Centisome position: 8.14

GC content: 53.98

Gene sequence:

>615_bases
TTGTTGACGGCGTCCGCCGAATCGCCTATCGCGGCGATCGGAGGTAGACCAATGTCGCAGAACCGTAGCAGAGATGATTT
CATTCGTTTCCTTGACTACCTAGGTGAAAAGGGACTTATAGCTCGGGCAACTGCTTCGGCTCGGCGGACGGCCGTGGCAA
AGGTGCTGGCGGTGCTGTCTGACGACGAAGCCGAGGACGTCACGAACCTAGACATCGATCACGTGATGGGGCGCTTTGAT
AATCTCAACCCGCATCAATACACGCCTGACAGTCTTCAAACCTACCGTAGCAGATTAAAGACGGCGCTAGAGGATTTTCG
TTCGTATAGCGAGAATCCGGTTAGCTTTCGTCCGAGCGGACAATCTCGGATGCGCCAAAAGGCGAATGGAAACAACGCGA
AACCGCAGAAGTCGAAAGCGCCGACCACTCAGACGTCGGCCTCTCCCCCGACAACCTCGTCACTTCCAATGGTCGATCTG
CCGAACGTAAATCAGTTGCCTGTGCAGTTGAGACAGAATCTGACGGTCCGGATTTTTGGCCTGCCTTTCGATCTTACGAT
GCAAGAGGCCCAAAAAATCGCAAACATCGTTTTGGCTCACGCATCGCCGGAATAG

Upstream 100 bases:

>100_bases
CGCGCAAGGGCCGCTTCGGGAAGCAGAGCAAGACGAAGTGGGGGCGGTGAAGGATTTTCAATTCTGCGTTCAGTTTTGAC
GTAGATGAACGTTAAACTTT

Downstream 100 bases:

>100_bases
TATGCAATGATCCGCTCCTTCGCAGAACCAGAAACGGAGCACGTCTGGCGCGGTGAACGCAGCCGCAAGCTGCCAGGGGA
CATTCAATCAACTGCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLTASAESPIAAIGGRPMSQNRSRDDFIRFLDYLGEKGLIARATASARRTAVAKVLAVLSDDEAEDVTNLDIDHVMGRFD
NLNPHQYTPDSLQTYRSRLKTALEDFRSYSENPVSFRPSGQSRMRQKANGNNAKPQKSKAPTTQTSASPPTTSSLPMVDL
PNVNQLPVQLRQNLTVRIFGLPFDLTMQEAQKIANIVLAHASPE

Sequences:

>Translated_204_residues
MLTASAESPIAAIGGRPMSQNRSRDDFIRFLDYLGEKGLIARATASARRTAVAKVLAVLSDDEAEDVTNLDIDHVMGRFD
NLNPHQYTPDSLQTYRSRLKTALEDFRSYSENPVSFRPSGQSRMRQKANGNNAKPQKSKAPTTQTSASPPTTSSLPMVDL
PNVNQLPVQLRQNLTVRIFGLPFDLTMQEAQKIANIVLAHASPE
>Mature_204_residues
MLTASAESPIAAIGGRPMSQNRSRDDFIRFLDYLGEKGLIARATASARRTAVAKVLAVLSDDEAEDVTNLDIDHVMGRFD
NLNPHQYTPDSLQTYRSRLKTALEDFRSYSENPVSFRPSGQSRMRQKANGNNAKPQKSKAPTTQTSASPPTTSSLPMVDL
PNVNQLPVQLRQNLTVRIFGLPFDLTMQEAQKIANIVLAHASPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22482; Mature: 22482

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00889 CNMP_BINDING_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTASAESPIAAIGGRPMSQNRSRDDFIRFLDYLGEKGLIARATASARRTAVAKVLAVLS
CCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHC
DDEAEDVTNLDIDHVMGRFDNLNPHQYTPDSLQTYRSRLKTALEDFRSYSENPVSFRPSG
CCCHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
QSRMRQKANGNNAKPQKSKAPTTQTSASPPTTSSLPMVDLPNVNQLPVQLRQNLTVRIFG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHCCCEEEEEC
LPFDLTMQEAQKIANIVLAHASPE
CCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLTASAESPIAAIGGRPMSQNRSRDDFIRFLDYLGEKGLIARATASARRTAVAKVLAVLS
CCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHC
DDEAEDVTNLDIDHVMGRFDNLNPHQYTPDSLQTYRSRLKTALEDFRSYSENPVSFRPSG
CCCHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
QSRMRQKANGNNAKPQKSKAPTTQTSASPPTTSSLPMVDLPNVNQLPVQLRQNLTVRIFG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHCCCEEEEEC
LPFDLTMQEAQKIANIVLAHASPE
CCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA