| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485768
Identifier: 103485768
GI number: 103485768
Start: 271425
End: 271712
Strand: Reverse
Name: 103485768
Synonym: Sala_0273
Alternate gene names: NA
Gene position: 271712-271425 (Counterclockwise)
Preceding gene: 103485769
Following gene: 103485767
Centisome position: 8.12
GC content: 55.56
Gene sequence:
>288_bases ATGATCCGCTCCTTCGCAGAACCAGAAACGGAGCACGTCTGGCGCGGTGAACGCAGCCGCAAGCTGCCAGGGGACATTCA ATCAACTGCGCGGCGGAAATTACGTCAACTCAATCGCACCACAAAACTTCAGGATCTGCGCGTTCCCGCAGGCAATCGAC TGGAACAGTTGAAAGGCTTCACACCTTTACGATATAGTCTGCGGATCAACGACCAGTGGCGGATCACCTTCCATTGGTCG AACGGAGGCGCTGACGATGTCCGGATCGAGGACTATCACCGAGGATGA
Upstream 100 bases:
>100_bases GACGGTCCGGATTTTTGGCCTGCCTTTCGATCTTACGATGCAAGAGGCCCAAAAAATCGCAAACATCGTTTTGGCTCACG CATCGCCGGAATAGTATGCA
Downstream 100 bases:
>100_bases CGACCGGCTGGACAATGTCCATCCCGGCGACATTCTGCGCCACGATTTCCTGATCGGCAGCGACATCGCCATTTCTGAGG TTGCTGATGGAGCCGGAATC
Product: plasmid maintenance system killer
Products: NA
Alternate protein names: Plasmid Maintenance System Killer Protein; Killer Protein; Plasmid Maintenance System Killer Family Protein; Proteic Killer Protein; Plasmid Maintenance System Protein; Xin HigB; Xin-Antitoxin System Toxin Component RelE Family; Xin Of Plasmid Maintenance System
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MIRSFAEPETEHVWRGERSRKLPGDIQSTARRKLRQLNRTTKLQDLRVPAGNRLEQLKGFTPLRYSLRINDQWRITFHWS NGGADDVRIEDYHRG
Sequences:
>Translated_95_residues MIRSFAEPETEHVWRGERSRKLPGDIQSTARRKLRQLNRTTKLQDLRVPAGNRLEQLKGFTPLRYSLRINDQWRITFHWS NGGADDVRIEDYHRG >Mature_95_residues MIRSFAEPETEHVWRGERSRKLPGDIQSTARRKLRQLNRTTKLQDLRVPAGNRLEQLKGFTPLRYSLRINDQWRITFHWS NGGADDVRIEDYHRG
Specific function: Unknown
COG id: COG3549
COG function: function code R; Plasmid maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11301; Mature: 11301
Theoretical pI: Translated: 11.35; Mature: 11.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSFAEPETEHVWRGERSRKLPGDIQSTARRKLRQLNRTTKLQDLRVPAGNRLEQLKGF CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHCCC TPLRYSLRINDQWRITFHWSNGGADDVRIEDYHRG CCEEEEEEECCEEEEEEEECCCCCCCCEECCCCCC >Mature Secondary Structure MIRSFAEPETEHVWRGERSRKLPGDIQSTARRKLRQLNRTTKLQDLRVPAGNRLEQLKGF CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHCCC TPLRYSLRINDQWRITFHWSNGGADDVRIEDYHRG CCEEEEEEECCEEEEEEEECCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA