Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485768

Identifier: 103485768

GI number: 103485768

Start: 271425

End: 271712

Strand: Reverse

Name: 103485768

Synonym: Sala_0273

Alternate gene names: NA

Gene position: 271712-271425 (Counterclockwise)

Preceding gene: 103485769

Following gene: 103485767

Centisome position: 8.12

GC content: 55.56

Gene sequence:

>288_bases
ATGATCCGCTCCTTCGCAGAACCAGAAACGGAGCACGTCTGGCGCGGTGAACGCAGCCGCAAGCTGCCAGGGGACATTCA
ATCAACTGCGCGGCGGAAATTACGTCAACTCAATCGCACCACAAAACTTCAGGATCTGCGCGTTCCCGCAGGCAATCGAC
TGGAACAGTTGAAAGGCTTCACACCTTTACGATATAGTCTGCGGATCAACGACCAGTGGCGGATCACCTTCCATTGGTCG
AACGGAGGCGCTGACGATGTCCGGATCGAGGACTATCACCGAGGATGA

Upstream 100 bases:

>100_bases
GACGGTCCGGATTTTTGGCCTGCCTTTCGATCTTACGATGCAAGAGGCCCAAAAAATCGCAAACATCGTTTTGGCTCACG
CATCGCCGGAATAGTATGCA

Downstream 100 bases:

>100_bases
CGACCGGCTGGACAATGTCCATCCCGGCGACATTCTGCGCCACGATTTCCTGATCGGCAGCGACATCGCCATTTCTGAGG
TTGCTGATGGAGCCGGAATC

Product: plasmid maintenance system killer

Products: NA

Alternate protein names: Plasmid Maintenance System Killer Protein; Killer Protein; Plasmid Maintenance System Killer Family Protein; Proteic Killer Protein; Plasmid Maintenance System Protein; Xin HigB; Xin-Antitoxin System Toxin Component RelE Family; Xin Of Plasmid Maintenance System

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MIRSFAEPETEHVWRGERSRKLPGDIQSTARRKLRQLNRTTKLQDLRVPAGNRLEQLKGFTPLRYSLRINDQWRITFHWS
NGGADDVRIEDYHRG

Sequences:

>Translated_95_residues
MIRSFAEPETEHVWRGERSRKLPGDIQSTARRKLRQLNRTTKLQDLRVPAGNRLEQLKGFTPLRYSLRINDQWRITFHWS
NGGADDVRIEDYHRG
>Mature_95_residues
MIRSFAEPETEHVWRGERSRKLPGDIQSTARRKLRQLNRTTKLQDLRVPAGNRLEQLKGFTPLRYSLRINDQWRITFHWS
NGGADDVRIEDYHRG

Specific function: Unknown

COG id: COG3549

COG function: function code R; Plasmid maintenance system killer protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11301; Mature: 11301

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSFAEPETEHVWRGERSRKLPGDIQSTARRKLRQLNRTTKLQDLRVPAGNRLEQLKGF
CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHCCC
TPLRYSLRINDQWRITFHWSNGGADDVRIEDYHRG
CCEEEEEEECCEEEEEEEECCCCCCCCEECCCCCC
>Mature Secondary Structure
MIRSFAEPETEHVWRGERSRKLPGDIQSTARRKLRQLNRTTKLQDLRVPAGNRLEQLKGF
CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHCCC
TPLRYSLRINDQWRITFHWSNGGADDVRIEDYHRG
CCEEEEEEECCEEEEEEEECCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA