| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485647
Identifier: 103485647
GI number: 103485647
Start: 146162
End: 146833
Strand: Reverse
Name: 103485647
Synonym: Sala_0151
Alternate gene names: NA
Gene position: 146833-146162 (Counterclockwise)
Preceding gene: 103485648
Following gene: 103485643
Centisome position: 4.39
GC content: 65.62
Gene sequence:
>672_bases ATGATGACGACCAAGGCCAGTCCCACCGCGGGATGGAAAAAGATCGCCGCGCAGGCGCTGTTCGGCGCCGTCGTCGGTGC GGCTGGCATGTTTGCGGCGCTGTCGCTGCTCGAAGGCGGCGATGGCAACGACTGGCCCGGATCGATCATCATCCTTCTGG GCGTGGGCTTCATCTACACGCTGATGGGCGCCTTCGTCGGGATCGGCACGCTCGCGCCACGGCTTGTCGGCCAGCGCCTG CTCAATGTCGCCGACGCCGAAGAAATCGTCGAAGAACGCTCGCACCTCGGCGGAAGTGCCATCGGGTGTCTCGCGCTCGG CGCCGGGTTGATGCTCCTCGCCTATGCGACGGGTAGCGAAGCGGTGGGAACAACGCCGCGCGTGAGTGTTGCGGCGGCAT TCTGGATCCTGGTCGCGGTGCTCGGCCTGTTTACGCTGGTGTCGGTCTGGATGTGGCGCGATTTCGACGAGCTGTGGCGC CAGCTGACGCTGGAGGTCACGGCGATCACCGGCAATTTGATGATGTTCGTCGCAGTTCTGTGGGGCGGCGCGGCCACAGC CGACCTCATCGCCGGTCCGCACCCGATCGACCTTGTATCGCTGTCGTTCGGGCTGATGCTGCTCGGCTGTTTTGTCGCAA CCGCGCGGCGGGGCATGATGGCGCCGCGATAG
Upstream 100 bases:
>100_bases AAATATGACCCCAGCCTGCCGCTGGCGCTGCGCATGGCGCGCCTCTTCGCGCTCGAAGTGTGCGAACTGTTCATCGATCA CTGGAACCCGAAGGAGTAGG
Downstream 100 bases:
>100_bases TGCCCCCCCGGTTCAGTCAGCCCCGCCGACATCCGCTGCGGCCGCTTCGGGCACCGGAGTAACTTGCGCATAGACGAGCT GCCATGCGCCATCGCGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MMTTKASPTAGWKKIAAQALFGAVVGAAGMFAALSLLEGGDGNDWPGSIIILLGVGFIYTLMGAFVGIGTLAPRLVGQRL LNVADAEEIVEERSHLGGSAIGCLALGAGLMLLAYATGSEAVGTTPRVSVAAAFWILVAVLGLFTLVSVWMWRDFDELWR QLTLEVTAITGNLMMFVAVLWGGAATADLIAGPHPIDLVSLSFGLMLLGCFVATARRGMMAPR
Sequences:
>Translated_223_residues MMTTKASPTAGWKKIAAQALFGAVVGAAGMFAALSLLEGGDGNDWPGSIIILLGVGFIYTLMGAFVGIGTLAPRLVGQRL LNVADAEEIVEERSHLGGSAIGCLALGAGLMLLAYATGSEAVGTTPRVSVAAAFWILVAVLGLFTLVSVWMWRDFDELWR QLTLEVTAITGNLMMFVAVLWGGAATADLIAGPHPIDLVSLSFGLMLLGCFVATARRGMMAPR >Mature_223_residues MMTTKASPTAGWKKIAAQALFGAVVGAAGMFAALSLLEGGDGNDWPGSIIILLGVGFIYTLMGAFVGIGTLAPRLVGQRL LNVADAEEIVEERSHLGGSAIGCLALGAGLMLLAYATGSEAVGTTPRVSVAAAFWILVAVLGLFTLVSVWMWRDFDELWR QLTLEVTAITGNLMMFVAVLWGGAATADLIAGPHPIDLVSLSFGLMLLGCFVATARRGMMAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23228; Mature: 23228
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTKASPTAGWKKIAAQALFGAVVGAAGMFAALSLLEGGDGNDWPGSIIILLGVGFIYT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LMGAFVGIGTLAPRLVGQRLLNVADAEEIVEERSHLGGSAIGCLALGAGLMLLAYATGSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC AVGTTPRVSVAAAFWILVAVLGLFTLVSVWMWRDFDELWRQLTLEVTAITGNLMMFVAVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH WGGAATADLIAGPHPIDLVSLSFGLMLLGCFVATARRGMMAPR HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMTTKASPTAGWKKIAAQALFGAVVGAAGMFAALSLLEGGDGNDWPGSIIILLGVGFIYT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LMGAFVGIGTLAPRLVGQRLLNVADAEEIVEERSHLGGSAIGCLALGAGLMLLAYATGSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC AVGTTPRVSVAAAFWILVAVLGLFTLVSVWMWRDFDELWRQLTLEVTAITGNLMMFVAVL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH WGGAATADLIAGPHPIDLVSLSFGLMLLGCFVATARRGMMAPR HCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA