| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485646
Identifier: 103485646
GI number: 103485646
Start: 145673
End: 146149
Strand: Direct
Name: 103485646
Synonym: Sala_0150
Alternate gene names: NA
Gene position: 145673-146149 (Clockwise)
Preceding gene: 103485645
Following gene: 103485649
Centisome position: 4.35
GC content: 71.28
Gene sequence:
>477_bases ATGATGCGTTTGGCGGTTCCGGCGCTCGTGTTTCTGGTCGCGGCGTGCGGCGCCTCCGCCGACCCGGCGGCGACCGTCGC CACCCCCGAAGGCTATCGCGAGGCGGCGGCGGCGTTCGACTCGGCGATCGCGGCGAAGGACGAGGCGGCGTTGCAGCGGC TGATCGCCGACGATTTCCTGTGGGTGCGCGGCAGCGGCGCGATGGGCGACAAGGCCGCGTTCATCGCCGCGCTCGCCGCA CCGTCGATCCGTATCGAACCCTTCCGGCCCGCTGAGCCGCGCTGGATCACCAGTGGCGACAGCGCGCTGCTCGCCGCGAC CAACAGGCTGCAGGGCACCGCCGACGGCGAGCCGTTCGTCGACCGGCACCGTTTTGCCGATCACTGGCTGTGGCGCGATG GCGCATGGCAGCTCGTCTATGCGCAAGTTACTCCGGTGCCCGAAGCGGCCGCAGCGGATGTCGGCGGGGCTGACTGA
Upstream 100 bases:
>100_bases CCTTTTCGTGGCGCGTTGACGTGCCAGGTAGTTGCGCGCGAGCTTGCCACCCGCGACATGACCGCCGATGACGGCGGGCA GGCGAAGGGAGATGGCGGGG
Downstream 100 bases:
>100_bases ACCGGGGGGGCACTATCGCGGCGCCATCATGCCCCGCCGCGCGGTTGCGACAAAACAGCCGAGCAGCATCAGCCCGAACG ACAGCGATACAAGGTCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MMRLAVPALVFLVAACGASADPAATVATPEGYREAAAAFDSAIAAKDEAALQRLIADDFLWVRGSGAMGDKAAFIAALAA PSIRIEPFRPAEPRWITSGDSALLAATNRLQGTADGEPFVDRHRFADHWLWRDGAWQLVYAQVTPVPEAAAADVGGAD
Sequences:
>Translated_158_residues MMRLAVPALVFLVAACGASADPAATVATPEGYREAAAAFDSAIAAKDEAALQRLIADDFLWVRGSGAMGDKAAFIAALAA PSIRIEPFRPAEPRWITSGDSALLAATNRLQGTADGEPFVDRHRFADHWLWRDGAWQLVYAQVTPVPEAAAADVGGAD >Mature_158_residues MMRLAVPALVFLVAACGASADPAATVATPEGYREAAAAFDSAIAAKDEAALQRLIADDFLWVRGSGAMGDKAAFIAALAA PSIRIEPFRPAEPRWITSGDSALLAATNRLQGTADGEPFVDRHRFADHWLWRDGAWQLVYAQVTPVPEAAAADVGGAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16606; Mature: 16606
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRLAVPALVFLVAACGASADPAATVATPEGYREAAAAFDSAIAAKDEAALQRLIADDFL CCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCEE WVRGSGAMGDKAAFIAALAAPSIRIEPFRPAEPRWITSGDSALLAATNRLQGTADGEPFV EEECCCCCCCHHHHHHHHCCCCEEECCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCHH DRHRFADHWLWRDGAWQLVYAQVTPVPEAAAADVGGAD HHHHHHHHHEECCCCEEEEEEEECCCCCHHHCCCCCCC >Mature Secondary Structure MMRLAVPALVFLVAACGASADPAATVATPEGYREAAAAFDSAIAAKDEAALQRLIADDFL CCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCEE WVRGSGAMGDKAAFIAALAAPSIRIEPFRPAEPRWITSGDSALLAATNRLQGTADGEPFV EEECCCCCCCHHHHHHHHCCCCEEECCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCHH DRHRFADHWLWRDGAWQLVYAQVTPVPEAAAADVGGAD HHHHHHHHHEECCCCEEEEEEEECCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA