Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485624

Identifier: 103485624

GI number: 103485624

Start: 123317

End: 124228

Strand: Reverse

Name: 103485624

Synonym: Sala_0128

Alternate gene names: NA

Gene position: 124228-123317 (Counterclockwise)

Preceding gene: 103485625

Following gene: 103485619

Centisome position: 3.71

GC content: 62.94

Gene sequence:

>912_bases
TTGGGACCGCATTCGGAGCGCAAGGAACAACGGCTTCTCCTGTTCTCCGCCACCGGCACCCTCGCCCTTTCCCTTGTTGG
CATCGCTATTGGCCTGTTGAGCGGCGCAAAGTCGATCTTGTTCGACGGTGTGTACAGCCTTGCCGACGCAGGGCTTACGC
TGGCCGCCTTTTTCGCCGCGCGGCTGATCGCGCGTGGCGCAGACCGCCGGTTCCAATATGGCTACTGGCACATCGAGCCG
ATGCTTGGGTTCGTCAACGGCAGCGTTCTGCTCCTCGCCTGCGCCTATGCATTGATTGACGGAGTAGACACCGTGATGAT
GGGAGGACGGAACGTGAGTTTCGGGCCCGGTATCGGATATGCCGGCGCGAGCGCGCTCATCGGCTTCGGGATGTATATTT
ATATCCGGCGCCGCGCTCGCGGCCTCGGGTCCTCGCTTCTGAATATCGACGCGGCCGCGTGGCTTTTCGGCGCACTTCTC
AACGCCGGGCTGAGCGCCGCATTTGTCACCGCGGTCGTGCTCGAGGGAACGCAGGCGGAGAAGCTCTCGGCCTATTTCGA
TCCGGCAATCCTCATCCTCCTTGCAATCTTCCTGGCTCCGCTTCCCCTTCGGGCCTTGGCAGCGGCCGGTCGCGAGATAC
TGCAGATCGCGCCAGCCGATCTCGATGCGCAGGTCAGCAGCATCGCACGCGAAGTCGCGGCACGGCACGGCTTCGTCGAG
CATCAATCCTATGTGACCCAGGTCGGCCGCGCAGGGTTTATCGAGATCGGCTTTGTCGGTGCCGCGGCATCGACCACGAT
GACGCTTGGCGAGCAGGACGCCATTCGTCAGGAATTTGCGGACGCGATGGGCGGGCTGCGCCCCGGATATTGGCTCACGA
TCGACTTCACGGCCGATCGCCGTTGGCTCTAA

Upstream 100 bases:

>100_bases
TAGGTCAGGCCAGTTGGAAATACATCGCCGGCAGCGTAACTCGCTACGATAACAGCCTCAGGTGACGGCCCTTGGACCGC
TGTAATATTGGAGATGGAAA

Downstream 100 bases:

>100_bases
GCGCGAGCAACTCCGGGGCGGCTCACGGTAACGCGCAAACGGGCGCCCGCTGTTCGGCGGACGCCCGTTAGTTTCAGACG
AGCATCTTTTCGCGCAGCAG

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: Cation Efflux Protein; Cation Transporter-Like Membrane Protein; Co/Zn/Cd Cation Transporter; Cation Efflux Transmembrane Protein; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux Transporter Protein; Cation Efflux System Component; Cation Efflux Family Protein

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MGPHSERKEQRLLLFSATGTLALSLVGIAIGLLSGAKSILFDGVYSLADAGLTLAAFFAARLIARGADRRFQYGYWHIEP
MLGFVNGSVLLLACAYALIDGVDTVMMGGRNVSFGPGIGYAGASALIGFGMYIYIRRRARGLGSSLLNIDAAAWLFGALL
NAGLSAAFVTAVVLEGTQAEKLSAYFDPAILILLAIFLAPLPLRALAAAGREILQIAPADLDAQVSSIAREVAARHGFVE
HQSYVTQVGRAGFIEIGFVGAAASTTMTLGEQDAIRQEFADAMGGLRPGYWLTIDFTADRRWL

Sequences:

>Translated_303_residues
MGPHSERKEQRLLLFSATGTLALSLVGIAIGLLSGAKSILFDGVYSLADAGLTLAAFFAARLIARGADRRFQYGYWHIEP
MLGFVNGSVLLLACAYALIDGVDTVMMGGRNVSFGPGIGYAGASALIGFGMYIYIRRRARGLGSSLLNIDAAAWLFGALL
NAGLSAAFVTAVVLEGTQAEKLSAYFDPAILILLAIFLAPLPLRALAAAGREILQIAPADLDAQVSSIAREVAARHGFVE
HQSYVTQVGRAGFIEIGFVGAAASTTMTLGEQDAIRQEFADAMGGLRPGYWLTIDFTADRRWL
>Mature_302_residues
GPHSERKEQRLLLFSATGTLALSLVGIAIGLLSGAKSILFDGVYSLADAGLTLAAFFAARLIARGADRRFQYGYWHIEPM
LGFVNGSVLLLACAYALIDGVDTVMMGGRNVSFGPGIGYAGASALIGFGMYIYIRRRARGLGSSLLNIDAAAWLFGALLN
AGLSAAFVTAVVLEGTQAEKLSAYFDPAILILLAIFLAPLPLRALAAAGREILQIAPADLDAQVSSIAREVAARHGFVEH
QSYVTQVGRAGFIEIGFVGAAASTTMTLGEQDAIRQEFADAMGGLRPGYWLTIDFTADRRWL

Specific function: Unknown

COG id: COG3965

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32125; Mature: 31993

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPHSERKEQRLLLFSATGTLALSLVGIAIGLLSGAKSILFDGVYSLADAGLTLAAFFAA
CCCCCCCHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
RLIARGADRRFQYGYWHIEPMLGFVNGSVLLLACAYALIDGVDTVMMGGRNVSFGPGIGY
HHHHHCCCCCEECCEEEHHHHHHHHCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCH
AGASALIGFGMYIYIRRRARGLGSSLLNIDAAAWLFGALLNAGLSAAFVTAVVLEGTQAE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
KLSAYFDPAILILLAIFLAPLPLRALAAAGREILQIAPADLDAQVSSIAREVAARHGFVE
HHHHHCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH
HQSYVTQVGRAGFIEIGFVGAAASTTMTLGEQDAIRQEFADAMGGLRPGYWLTIDFTADR
HHHHHHHHCCCCEEEEEEECCHHHHHEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCC
RWL
CCC
>Mature Secondary Structure 
GPHSERKEQRLLLFSATGTLALSLVGIAIGLLSGAKSILFDGVYSLADAGLTLAAFFAA
CCCCCCHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
RLIARGADRRFQYGYWHIEPMLGFVNGSVLLLACAYALIDGVDTVMMGGRNVSFGPGIGY
HHHHHCCCCCEECCEEEHHHHHHHHCHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCH
AGASALIGFGMYIYIRRRARGLGSSLLNIDAAAWLFGALLNAGLSAAFVTAVVLEGTQAE
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
KLSAYFDPAILILLAIFLAPLPLRALAAAGREILQIAPADLDAQVSSIAREVAARHGFVE
HHHHHCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH
HQSYVTQVGRAGFIEIGFVGAAASTTMTLGEQDAIRQEFADAMGGLRPGYWLTIDFTADR
HHHHHHHHCCCCEEEEEEECCHHHHHEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCC
RWL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA