| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is yfcG [H]
Identifier: 103485594
GI number: 103485594
Start: 99504
End: 100208
Strand: Direct
Name: yfcG [H]
Synonym: Sala_0097
Alternate gene names: 103485594
Gene position: 99504-100208 (Clockwise)
Preceding gene: 103485593
Following gene: 103485595
Centisome position: 2.97
GC content: 61.7
Gene sequence:
>705_bases ATGCCAGACCTCTCGACCTTTCCTATTACGCAGCGCTGGCCCGCATTGCATCCCGATCGCCTGCAACTCTACGCCGCTCC CACCCCCAATGGCGTCAAGGTCTCGATCATGCTCGAGGAGACCGGCCTGGCGTACGAGCCCCACCTGGTCGATATCTCGA ACAACGAGTCGAAGGATCCAGCGTTCGTATCGTTGAACCCCAACGGCCGCATACCGGCGATCATCGATCCGGCTGGTCCT GACGGCAACCCTATCGCCATATGGGAATCGGGCGCGATCCTCCTCTACCTGGCCGACAAAACCGGCCAGCTCAATTCGAG TGCGCCCGCGCAGCGTTACGAGACGCTGGCTTGGGTATTCTTTCAAGTATCCGGCGTCGGGCCGACCTTCGGTCAGCTTG GTTTTTTCCTGAAATTTGCCGGCAAGGACTATGAGGACAAGCGCCCTCGGCAGCGCTTTATCGATGAATCCAAGCGTCTC TTGGGGGTGCTGGACCGCCAGCTCGAAGGCCGCGAATGGCTTGTCGATGATTATTCGATCGCGGACATTGCGACACTTGG GTGGGTCAACGCACTGGCCGAAGTCTACGCGGCCGGCGACATCCTCGGCCTCGGCGAATATTCGAACGTCCAGACATGGC TCCGCCGCGGGCTGGCGCGGCCCGCGGTGCAGCGCGGCCTGCGCATCCCTGCGAGACCGGCATGA
Upstream 100 bases:
>100_bases TCTTCATGACCGCGTCGTACAACGACGCGGTCATCCAACCCTGCTTCAGAGAGACGGGTCGGTCCATATAGTCGCCATCG CAGCACAGGATCGCAGATTT
Downstream 100 bases:
>100_bases GCGTCATCGCTGCTTATTATTACAACAAGGGCCTGCGGGTCCGCGAAATCGCGATCGACGAGCAGGTCCAGCTCGATAAG GATCGCTCCGGCTTTTGCTG
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MPDLSTFPITQRWPALHPDRLQLYAAPTPNGVKVSIMLEETGLAYEPHLVDISNNESKDPAFVSLNPNGRIPAIIDPAGP DGNPIAIWESGAILLYLADKTGQLNSSAPAQRYETLAWVFFQVSGVGPTFGQLGFFLKFAGKDYEDKRPRQRFIDESKRL LGVLDRQLEGREWLVDDYSIADIATLGWVNALAEVYAAGDILGLGEYSNVQTWLRRGLARPAVQRGLRIPARPA
Sequences:
>Translated_234_residues MPDLSTFPITQRWPALHPDRLQLYAAPTPNGVKVSIMLEETGLAYEPHLVDISNNESKDPAFVSLNPNGRIPAIIDPAGP DGNPIAIWESGAILLYLADKTGQLNSSAPAQRYETLAWVFFQVSGVGPTFGQLGFFLKFAGKDYEDKRPRQRFIDESKRL LGVLDRQLEGREWLVDDYSIADIATLGWVNALAEVYAAGDILGLGEYSNVQTWLRRGLARPAVQRGLRIPARPA >Mature_233_residues PDLSTFPITQRWPALHPDRLQLYAAPTPNGVKVSIMLEETGLAYEPHLVDISNNESKDPAFVSLNPNGRIPAIIDPAGPD GNPIAIWESGAILLYLADKTGQLNSSAPAQRYETLAWVFFQVSGVGPTFGQLGFFLKFAGKDYEDKRPRQRFIDESKRLL GVLDRQLEGREWLVDDYSIADIATLGWVNALAEVYAAGDILGLGEYSNVQTWLRRGLARPAVQRGLRIPARPA
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=209, Percent_Identity=41.1483253588517, Blast_Score=140, Evalue=6e-35, Organism=Escherichia coli, GI87082195, Length=226, Percent_Identity=42.0353982300885, Blast_Score=137, Evalue=5e-34, Organism=Escherichia coli, GI87081789, Length=206, Percent_Identity=28.6407766990291, Blast_Score=60, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324100, Length=242, Percent_Identity=35.1239669421488, Blast_Score=111, Evalue=1e-25, Organism=Drosophila melanogaster, GI17864592, Length=201, Percent_Identity=30.8457711442786, Blast_Score=71, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 25858; Mature: 25726
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLSTFPITQRWPALHPDRLQLYAAPTPNGVKVSIMLEETGLAYEPHLVDISNNESKDP CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCEECCEEEECCCCCCCCC AFVSLNPNGRIPAIIDPAGPDGNPIAIWESGAILLYLADKTGQLNSSAPAQRYETLAWVF EEEEECCCCCCCEEECCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHEEEE FQVSGVGPTFGQLGFFLKFAGKDYEDKRPRQRFIDESKRLLGVLDRQLEGREWLVDDYSI EEEECCCCCHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCH ADIATLGWVNALAEVYAAGDILGLGEYSNVQTWLRRGLARPAVQRGLRIPARPA HHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCHHHHHCCCCCCCCC >Mature Secondary Structure PDLSTFPITQRWPALHPDRLQLYAAPTPNGVKVSIMLEETGLAYEPHLVDISNNESKDP CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCEECCEEEECCCCCCCCC AFVSLNPNGRIPAIIDPAGPDGNPIAIWESGAILLYLADKTGQLNSSAPAQRYETLAWVF EEEEECCCCCCCEEECCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCHHHHHHHEEEE FQVSGVGPTFGQLGFFLKFAGKDYEDKRPRQRFIDESKRLLGVLDRQLEGREWLVDDYSI EEEECCCCCHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCH ADIATLGWVNALAEVYAAGDILGLGEYSNVQTWLRRGLARPAVQRGLRIPARPA HHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]