Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485573

Identifier: 103485573

GI number: 103485573

Start: 81527

End: 82579

Strand: Reverse

Name: 103485573

Synonym: Sala_0075

Alternate gene names: NA

Gene position: 82579-81527 (Counterclockwise)

Preceding gene: 103485574

Following gene: 103485572

Centisome position: 2.47

GC content: 61.92

Gene sequence:

>1053_bases
ATGACCGATCATAGCGACACCGATCGCAGGCTTTTCCTCCAGACGGCCGGGCTTGGCGCAGCCGGAATGGCAATGACGGC
CCTCGGCCTGCCCGGCACATCACAAGCCGCGCTACTTGCCCCGACGCGACCCATGGCCGCCGGCTCCTCTCCCACGTTGG
GGCCGTTGCGGCAGATACGGGCAGGCGAACTGGACATCGCCTATATCGAAATGGGTCCGCCCAAGGGGCAGGTCGCCATT
CTCTTACACGGCTGGCCGTATGACATCCATTGTTACGAAGAGGTCGCGCCGCTGCTTGCCAAGGCAGGCTACCGCGTGAT
TATTCCCTATCTGCGCGGATATGGTGCCACGCGGTTCGTTGCGGCCGACACGCTGCGCAACGGTCAGCAAGCCGCGTTGG
CACAGGATGTGATCGCGCTGATGGATGCGCTCAGGATCCAGACCACGACGGTTGCAGGATGCGACTGGGGTGCACGCACC
GCCTGCATCGTTGCCGCGATCTGGCCCGAGCGCGTCACTGCACTGGTGTCGGTCAGCGGCTATCTCATCGGCAGTCAGCA
GGCCAATGTCATGCCGCTACCTCCGAAAGCCGAGCTGAGCTGGTGGTACCAATTCTACTTTGCGACCGACCGCGGCGAGC
GCGGTTATGAGGCCAATCGCAAGGAGTTCGCCAAACTCATCTGGCATACGGCATCGCCCGAATGGAAGTTCGATGATGCG
ACCTTCGACCGATCGGCGCAGGCATTCGACAATCCCGACCATGTCGCGATCGTGATCCATAATTACCGCTGGCGATTGGG
TGCGGCAGCAGGCGATCCGAAATATGATGCACTGGAAAAGCGTCTCGCCGAAAGCCCGACCATCGGCGTGCCGACGATCA
CCCTTGAAGGCGACGCGAATGGCGCTCCGCACCCCGATCCAGCCGCCTATGCCAAGAAATTCACGGGGAAATACGCTCAC
CGCAATATCACTGGCGGCATCGGGCATAATCTACCGCAAGAGGCGCCCAAGGCTTTTGCCGACGCCGTACTGCAGGCGGC
GACTCCGGCATGA

Upstream 100 bases:

>100_bases
CGATCGCGCGGTTGTCGCGTTCACCGTGCCGGCGACAACCACACCGCATCATTGATCCAAACCGCCGATCCCCTTGGGCA
AACCAAAAAAGGATATCATC

Downstream 100 bases:

>100_bases
CAAGCGGAACGTCGAACGCAAAGAATGTAACGTCCCTGCCCTCGCAACCGAAACGCACAGGCGCGGGGAACGCAGCCGCA
TGTCCGGCCCTTGAAGGGCT

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold; Epoxide Hydrolase; Epoxide Hydrolase Protein; Alpha/Beta Hydrolase; Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Fold Family Hydrolase; Twin-Arginine Translocation Pathway Signal; Hydrolase Alpha/Beta Fold; Hydrolase Alpha/Beta Fold Family; Hydrolase Or Acyltransferase; GCN5-Related N-Acetyltransferase; Haloalkane Dehalogenase; Dehalogenase/Hydrolase; S33 Family Peptidase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Epoxide Hydrolase EphF; Alpha/Beta Hydrolase Superfamily Protein; Epoxide Hydrolase EphB; Alpha/Beta Hydrolase Superfamily Hydrolase/Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Fold Hydrolase

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTDHSDTDRRLFLQTAGLGAAGMAMTALGLPGTSQAALLAPTRPMAAGSSPTLGPLRQIRAGELDIAYIEMGPPKGQVAI
LLHGWPYDIHCYEEVAPLLAKAGYRVIIPYLRGYGATRFVAADTLRNGQQAALAQDVIALMDALRIQTTTVAGCDWGART
ACIVAAIWPERVTALVSVSGYLIGSQQANVMPLPPKAELSWWYQFYFATDRGERGYEANRKEFAKLIWHTASPEWKFDDA
TFDRSAQAFDNPDHVAIVIHNYRWRLGAAAGDPKYDALEKRLAESPTIGVPTITLEGDANGAPHPDPAAYAKKFTGKYAH
RNITGGIGHNLPQEAPKAFADAVLQAATPA

Sequences:

>Translated_350_residues
MTDHSDTDRRLFLQTAGLGAAGMAMTALGLPGTSQAALLAPTRPMAAGSSPTLGPLRQIRAGELDIAYIEMGPPKGQVAI
LLHGWPYDIHCYEEVAPLLAKAGYRVIIPYLRGYGATRFVAADTLRNGQQAALAQDVIALMDALRIQTTTVAGCDWGART
ACIVAAIWPERVTALVSVSGYLIGSQQANVMPLPPKAELSWWYQFYFATDRGERGYEANRKEFAKLIWHTASPEWKFDDA
TFDRSAQAFDNPDHVAIVIHNYRWRLGAAAGDPKYDALEKRLAESPTIGVPTITLEGDANGAPHPDPAAYAKKFTGKYAH
RNITGGIGHNLPQEAPKAFADAVLQAATPA
>Mature_349_residues
TDHSDTDRRLFLQTAGLGAAGMAMTALGLPGTSQAALLAPTRPMAAGSSPTLGPLRQIRAGELDIAYIEMGPPKGQVAIL
LHGWPYDIHCYEEVAPLLAKAGYRVIIPYLRGYGATRFVAADTLRNGQQAALAQDVIALMDALRIQTTTVAGCDWGARTA
CIVAAIWPERVTALVSVSGYLIGSQQANVMPLPPKAELSWWYQFYFATDRGERGYEANRKEFAKLIWHTASPEWKFDDAT
FDRSAQAFDNPDHVAIVIHNYRWRLGAAAGDPKYDALEKRLAESPTIGVPTITLEGDANGAPHPDPAAYAKKFTGKYAHR
NITGGIGHNLPQEAPKAFADAVLQAATPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37781; Mature: 37650

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDHSDTDRRLFLQTAGLGAAGMAMTALGLPGTSQAALLAPTRPMAAGSSPTLGPLRQIR
CCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHC
AGELDIAYIEMGPPKGQVAILLHGWPYDIHCYEEVAPLLAKAGYRVIIPYLRGYGATRFV
CCCEEEEEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCEEEEHHHHCCCCEEEE
AADTLRNGQQAALAQDVIALMDALRIQTTTVAGCDWGARTACIVAAIWPERVTALVSVSG
EHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECHHHHHHHEEECE
YLIGSQQANVMPLPPKAELSWWYQFYFATDRGERGYEANRKEFAKLIWHTASPEWKFDDA
EEEECCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
TFDRSAQAFDNPDHVAIVIHNYRWRLGAAAGDPKYDALEKRLAESPTIGVPTITLEGDAN
CCCCCCHHCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCC
GAPHPDPAAYAKKFTGKYAHRNITGGIGHNLPQEAPKAFADAVLQAATPA
CCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDHSDTDRRLFLQTAGLGAAGMAMTALGLPGTSQAALLAPTRPMAAGSSPTLGPLRQIR
CCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHC
AGELDIAYIEMGPPKGQVAILLHGWPYDIHCYEEVAPLLAKAGYRVIIPYLRGYGATRFV
CCCEEEEEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCEEEEHHHHCCCCEEEE
AADTLRNGQQAALAQDVIALMDALRIQTTTVAGCDWGARTACIVAAIWPERVTALVSVSG
EHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECHHHHHHHEEECE
YLIGSQQANVMPLPPKAELSWWYQFYFATDRGERGYEANRKEFAKLIWHTASPEWKFDDA
EEEECCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
TFDRSAQAFDNPDHVAIVIHNYRWRLGAAAGDPKYDALEKRLAESPTIGVPTITLEGDAN
CCCCCCHHCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCC
GAPHPDPAAYAKKFTGKYAHRNITGGIGHNLPQEAPKAFADAVLQAATPA
CCCCCCHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA