Sebaldella termitidis ATCC 33386
Names | Sebaldella termitidis ATCC 33386 |
---|---|
Accession numbers | NC_013517, NC_013518, NC_013519 |
Background | Sebaldella termitidis (strain ATCC 33386 / NCTC 11300), formerly Bacteroides termitidis, is an uricolytic, obligately anaerobic Gram-negative bacterium isolated from the termite intestine. It is nonmotile and has rod-shaped cells with central swellings that occur singly, in pairs, and in filaments. Surface colonies are 1 to 2 mm in diameter, circular, and transparent to opaque. Colonies in deep agar are lenticular and nonpigmented. This organism is able to degrade uric acid to CO2, acetate, and ammonia, and may play a role in providing nitrogen to the termite host. Acetic and lactic acids are the major end products of glucose metabolism; formic acid may also be produced. Acid is produced from glucose, fructose, maltose, mannitol, mannose, rhamnose, sucrose, trehalose, and xylose. (Adaptated from: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=29539). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Fusobacteria |
Class: | Fusobacteria |
Order: | Fusobacteriales |
Family: | Fusobacteriaceae |
Genus: | Sebaldella |
Species: | termitidis |
Strain | ATCC 33386 |
Complete | Yes |
Sequencing centre | (08-SEP-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA (18-NOV-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger, 454 |
Isolation site | posterior intestinal content of termites |
Isolation country | NA |
Number of replicons | 3 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Anaerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | Free living |
Host name | Termite |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | Uricolytic |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Pentose and glucuronate interconversions
Fructose and mannose metabolism
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Pentose and glucuronate interconversions
Fructose and mannose metabolism
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis