Edwardsiella tarda EIB202
Names | Edwardsiella tarda EIB202 |
---|---|
Accession numbers | NC_013508, NC_013509 |
Background | Edwardsiella tarda (strain EIB202) is a Gram-negative bacterium member of the normal gut microflora of fish, humans, chickens and other animals. This is the etiological agent for edwardsiellosis, a devastating fish disease prevailing in worldwide aquaculture industries and accounting for severe economical losses. This disease is often associated with poor water. E. tarda is pathogen of marine and freshwater fish isolated from channel catfish, Japanese eels, flounder, tilapia, and other economically important fish. It commonly affects more than 20 species of fishes including carp, tilapia, eel, catfish, mullet, salmon, trout, turbot and flounder, causing systemic hemorrhagic septicemia and emphysematous putrefactive disease with swelling skin lesions, as well as ulcer and necrosis in internal organs such as liver, kidney, spleen, and musculature. Besides piscine species, E. tarda also inhabits and infects a broad range of cold or warm -blooded hosts such as reptiles, amphibians, birds, mammals and even humans, raising a concern about E. tarda being a significant zoonotic pathogen. It causes opportunistic infections in humans, most commonly gastroenteritis and wound infections. However, this organism has been isolated from cases of septicemia and meningitis, primarily in immunocompromised patients. (Adaptated from PMID: 19865481). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Proteobacteria |
Class: | Gammaproteobacteria |
Order: | Enterobacteriales |
Family: | Enterobacteriaceae |
Genus: | Edwardsiella |
Species: | tarda |
Strain | EIB202 |
Complete | Yes |
Sequencing centre | (15-AUG-2008) State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, (17-NOV-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger, 454-GS20 |
Isolation site | diseased turbot (Scophthalmus maximus) in a mariculture farm in Yantai, Shandong province of China |
Isolation country | China |
Number of replicons | 2 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | No |
Flagellar presence | Yes |
Number of membranes | 2 |
Oxygen requirements | Facultative |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | Homo sapiens |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | Systemic disease in fish, occassional gastroenteritis, septicemia, and wound infections in humans |
Pathogenicity | Rarely |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Glutathione metabolism
Starch and sucrose metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Glycerophospholipid metabolism
Pyruvate metabolism
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Glutathione metabolism
Starch and sucrose metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Glycerophospholipid metabolism
Pyruvate metabolism
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Aminoacyl-tRNA biosynthesis