Halomicrobium mukohataei DSM 12286

Names | Halomicrobium mukohataei DSM 12286 |
---|---|
Accession numbers | NC_013201, NC_013202 |
Background | Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) is a halophilic archaeon, originally isolated from alt flats in Argentina. This organism is an extreme halophile requiring at least 14.5% NaCl to grow. The optimal growth with the normal rod-shaped morphology is obtained at about 45 degrees Celsius. Above this temperature, cells grow rapidly, but assume a spherical morphology. No growth is obtained above 52 degrees Celsius. The pH range for growth is 6.2-8.0, and no growth is observed below pH 6.0 or above pH 8.2. H.mukohataei grows on glucose, galactose, sucrose, maltose or glycerol as single carbon and energy source. No growth is obtained on sodium acetate, sodium succinate, L-glutamate or ribose. Anaerobic growth is observed with nitrate as electron acceptor, with the formation of nitrite and gas. (Adapted from PMID: 12361294). (HAMAP: HALMD) |
Taxonomy | |
Kingdom: | Archaea |
Phylum: | Euryarchaeota |
Class: | Halobacteria |
Order: | Halobacteriales |
Family: | Halobacteriaceae |
Genus: | Halomicrobium |
Species: | mukohataei |
Strain | DSM 12286 |
Complete | Yes |
Sequencing centre | (03-SEP-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (10-AUG-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger, 454 |
Isolation site | Salinas grandes from Andes highlands in Jujuy Argentina |
Isolation country | Argentina |
Number of replicons | 2 |
Gram staining properties | NA |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 1 |
Oxygen requirements | Facultative |
Optimal temperature | 45.0 |
Temperature range | Mesophilic |
Habitat | Specialized |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Singles |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Streptomycin biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
Streptomycin biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis