Slackia heliotrinireducens DSM 20476
Names | Slackia heliotrinireducens DSM 20476 |
---|---|
Accession numbers | NC_013165 |
Background | Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) is a nonmotile, obligate anaerobe, pyrrolizidine alkaloids metabolizer Gram-positive bacterium, originally isolated from the rumen of a sheep, Australia. This organism can degrade by oxidative cleavage the toxic alkaloid heliotrine (a pyrrolizidine alkaloid) which is produced by the plant Heliotropium europaeum. (Adaptated from PMID: 12488016). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Actinobacteria |
Class: | Actinobacteria |
Order: | Coriobacteriales |
Family: | Coriobacteriaceae |
Genus: | Slackia |
Species: | heliotrinireducens |
Strain | DSM 20476 |
Complete | Yes |
Sequencing centre | (10-AUG-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA (28-AUG-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger, 454 |
Isolation site | Sheep rumen, Australia |
Isolation country | Australia |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Anaerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | Sheep |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | Pyrrolizidine alkaloids metabolizer |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Citrate cycle (TCA cycle)
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis