Streptococcus suis SC84
Names | Streptococcus suis SC84 |
---|---|
Accession numbers | NC_012924 |
Background | Streptococci are non-motile, Gram-positive cocci with widely varying pathogenic potential that occur in pairs or chains. Streptococcus suis is a major porcine pathogen in many countries. It causes serious zoonotic diseases (diseases which can be transmitted naturally between animals and humans) such as meningitis, septicaemia, endocarditis, arthritis, and septic shock in both pigs and human beings, and mortality is high. There are 35 serotypes of S.suis, of which serotype SS2 is the most prevalent. Human infection is almost always associated with exposure to pigs or their food products. Infection is rare in Europe and N. America, while infections rates with S. suis are greater in S.E. Asia and China. Meningitis is the most common presentation in humans, but septicemia and endocarditis are also seen. S. suis strain SC84 is ST7, which is closely related to ST1, and was isolated from a case of streptococcal toxic shock-like syndrome in Sichuan Province, China in 2005. It is resistant to tetracycline, and susceptible to penicillin, ampicillin, cefotaxime, ceftriaxone, cefepime, meropenem, levofloxacin, chloramphenicol, erythromycin, azithromycin, clindamycin, and vancomycin. It contains an almost identical pathogenicity island to that previously found in human pathogenic strains (STRS2 and STRSY). This island is not however absolutely required for human pathogenicity (adapted from PubMed 19603075). (HAMAP: STRSX) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Firmicutes |
Class: | Bacilli |
Order: | Lactobacillales |
Family: | Streptococcaceae |
Genus: | Streptococcus |
Species: | suis |
Strain | SC84 |
Complete | Yes |
Sequencing centre | (10-JUL-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (20-OCT-2008) Holden M.T.G., Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger, Illumina, 454-GS-FLX |
Isolation site | case of streptococcal toxic shock-like syndrome in Sichuan Province, China in 2005 |
Isolation country | China |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | Cocci |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Facultative |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | Homo sapiens |
Cell arrangement | Chains, Pairs |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | Meningitis, arthritis, pneumonia |
Pathogenicity | Yes |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis