Kosmotoga olearia TBF 19.5.1
Names | Kosmotoga olearia TBF 19.5.1 |
---|---|
Accession numbers | NC_012785 |
Background | Kosmotoga olearia (strain TBF 19.5.1) is a Gram-negative bacterium isolated from an oil deposit and has a broad temperature growth range, so it is useful for comparative structural biology of thermophilic and mesophilic proteins as well as learning about oil deposit ecosystems. It has the characteristic morphology of one or more cells contained in a sheath-like envelope which extends beyond the cell wall. (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Thermotogae |
Class: | Thermotogae |
Order: | Thermotogales |
Family: | Thermotogaceae |
Genus: | Kosmotoga |
Species: | olearia |
Strain | TBF 19.5.1 |
Complete | Yes |
Sequencing centre | (03-JUN-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA (09-JUN-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | 454-GS-FLX |
Isolation site | Troll B Oil Platform in the North Sea |
Isolation country | Norway |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | NA |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Aquatic |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis