Brevibacillus brevis NBRC 100599
Names | Brevibacillus brevis NBRC 100599 |
---|---|
Accession numbers | NC_012491 |
Background | Brevibacillus brevis NBRC 100599, formerly known as Bacillus brevis 47, is a strictly aerobic, Gram-positive, spore-forming soil bacterium. It has a characteristic three-layered cell wall composed of a peptidoglycan-layer and the outer two S-layers, each consisting of single protein species, and is known to secrete large amounts of proteins into the culture media. The proteins secreted by this strain are mainly derived from the outer two layers of the cell wall, which are shed into the medium with the progress of cell growth. In secretes little protease, which enables easy recovery of the secreted proteins with minimal degradation, and thus it has been used as a good host for production of heterologous proteins. The genome lacks several sugar metabolism genes found in Bacillus subtilis, showing that B. brevis is unable to utilize L-arabinose, D-mannose and D-xylose. The abundance of genes involved in response to environmental stress, such as those encoding sigma factors and chemotaxis receptors, suggests that this bacterium has a great capacity of adaptation to diverse environments (adapted from http://www.bio.nite.go.jp/dogan/About?GENOME_ID=bbr_G1). (HAMAP: BREBN) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Firmicutes |
Class: | Bacilli |
Order: | Bacillales |
Family: | Paenibacillaceae |
Genus: | Brevibacillus |
Species: | brevis |
Strain | NBRC 100599 |
Complete | Yes |
Sequencing centre | (01-APR-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (31-MAR-2005) Contact:Director-General Department of Biotechnology National Institute of Technology and Evaluation |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | soil |
Isolation country | Japan |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 1 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Terrestrial |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | Sporulating |
Metabolism | Gramicidin producer Tyrosidine producer |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fructose and mannose metabolism
Galactose metabolism
Fatty acid biosynthesis
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Peptidoglycan biosynthesis
Pyruvate metabolism
Glyoxylate and dicarboxylate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fructose and mannose metabolism
Galactose metabolism
Fatty acid biosynthesis
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Peptidoglycan biosynthesis
Pyruvate metabolism
Glyoxylate and dicarboxylate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis