Staphylococcus carnosus subsp. carnosus TM300

Names | Staphylococcus carnosus subsp. carnosus TM300 |
---|---|
Accession numbers | NC_012121 |
Background | Gram-positive nonmotile coccus. It has been known since the 1950s that Staphylococci play a role in the fermentation of dry sausages. Known as Staphylococcus carnosus, these non-pathogenic bacteria are used to allow the fermentation and ripening process to be carried out under controlled conditions. Thus food poisoning and food spoilage microorganisms can be suppressed. During the ripening process of dry sausage, S. carnosus exerts several desired functions such as giving the typical red color, and the development of characteristic flavor. Commercial starter cultures of S. carnosus are manufactured in many European countries, and therefore S. carnosus is regarded as a "food grade" staphylococcal species. Its natural environment remains unknown.The TM300 genome does not contain mobile elements such as plasmids, insertion sequences or transposons, and has only 1 prophage; the number of repeat sequences is markedly decreased, suggesting a comparatively high genome stability. It lacks most of the toxins typical of S. aureus as well as genes involved in biofilm formation, underscoring its nonpathogenic status (adapted from PubMed 19060169). (HAMAP: STACT) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Firmicutes |
Class: | Bacilli |
Order: | Bacillales |
Family: | Staphylococcaceae |
Genus: | Staphylococcus |
Species: | carnosus |
Strain | TM300 |
Complete | Yes |
Sequencing centre | (02-MAR-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (27-JUL-2006) Rosenstein R., Mikrobielle Genetik, Universitaet Tuebingen, Waldhaeuser Strasse 70/8, 72076, GERMANY |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Bavaria, Germany |
Isolation country | Germany |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | NA |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Facultative |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | NA |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Clusters, Singles |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Peptidoglycan biosynthesis
Glycerolipid metabolism
Pyruvate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Peptidoglycan biosynthesis
Glycerolipid metabolism
Pyruvate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis