Macrococcus caseolyticus JCSC5402
Names | Macrococcus caseolyticus JCSC5402 |
---|---|
Accession numbers | NC_011995, NC_011996, NC_011997, NC_011998, NC_011999, NC_012000, NC_012001, NC_012002, NC_012003 |
Background | Macrococcus caseolyticus (strain JCSC5402) is a large gram positive coccus isolated from animal meat in a supermarket. It is related to the Staphylococcus. It possesses a small chromosome (2.1 MB) and 8 plasmids, and lacks many sugar and amino acid metabolism pathways and a plethora of virulence genes that are present in S. aureus. M. caseolyticus possesses a series of oxidative phosphorylation machineries that are closely related to those in the family Bacillaceae. It has also a probable primordial form of a Macrococcus methicillin resistance gene complex, mecIRAm, on one of its eight. This is the first finding of a plasmid-encoding methicillin resistance gene. M. caseolyticus is considered to reflect the genome of ancestral bacteria before the speciation of staphylococcal species and may be closely associated with the origin of the methicillin resistance gene complex of the notorious human pathogen methicillin-resistant S. aureus. Unlike staphylococcal species, M. caseolyticus do not cause human or animal diseases. (Adaptated from PMID: 19435847). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Firmicutes |
Class: | Bacilli |
Order: | Bacillales |
Family: | Staphylococcaceae |
Genus: | Macrococcus |
Species: | caseolyticus |
Strain | JCSC5402 |
Complete | Yes |
Sequencing centre | (26-JUL-2007) Contact:Tadashi Baba Juntendo University School of Medicine, Department of Bacteriology (29-JAN-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA 2-1-1 Hongo, |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger |
Isolation site | animal meat in a supermarket |
Isolation country | NA |
Number of replicons | 9 |
Gram staining properties | Positive |
Shape | Cocci |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Facultative |
Optimal temperature | 35.0 |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Clusters, Singles |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | None |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis