Haemophilus parasuis SH0165
Names | Haemophilus parasuis SH0165 |
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Accession numbers | NC_011852 |
Background | Haemophilus parasuis is a nonmotile, nicotinamide adenine dinucleotide (NAD)-dependent, small pleomorphic Gram-negative rod of the Pasteurellaceae family. It is a commensal organism of the upper respiratory tract of swine that can cause Glaessers disease, a severe systemic disease characterized by fibrinous polyserositis, arthritis, and meningitis. Fifteen serovars of H. parasuis have been reported, but a high percentage of the evaluated isolates are nontypeable; serovars 4 and 5 are widely associated with epidemics and serovar 5 is always associated with high-level virulence in pigs. Strain SHO165 is a highly virulent serovar 5 strain was isolated from a Glaessers disease outbreak farm. It is predicted to have 6 phage islands, 9 intact toxin and antitoxin systems and a large number of transporter- associated genes. About 9% of the CDS are pseudogenes (modified from PubMed 15892739 and 19074396). (HAMAP: HAEPS) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Proteobacteria |
Class: | Gammaproteobacteria |
Order: | Pasteurellales |
Family: | Pasteurellaceae |
Genus: | Haemophilus |
Species: | parasuis |
Strain | SH0165 |
Complete | Yes |
Sequencing centre | (07-JAN-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (19-DEC-2008) Division of Animal Infectious Disease, State Key Laboratory of Agricultural Microorganism, College of |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger, 454-GS-FLX |
Isolation site | isolated from a Glasser's disease outbreak farm |
Isolation country | China |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Facultative |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | Free living |
Host name | Swine |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | Glasser's disease |
Pathogenicity | NA |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis