Haemophilus parasuis SH0165
| Names | Haemophilus parasuis SH0165 |
|---|---|
| Accession numbers | NC_011852 |
| Background | Haemophilus parasuis is a nonmotile, nicotinamide adenine dinucleotide (NAD)-dependent, small pleomorphic Gram-negative rod of the Pasteurellaceae family. It is a commensal organism of the upper respiratory tract of swine that can cause Glaessers disease, a severe systemic disease characterized by fibrinous polyserositis, arthritis, and meningitis. Fifteen serovars of H. parasuis have been reported, but a high percentage of the evaluated isolates are nontypeable; serovars 4 and 5 are widely associated with epidemics and serovar 5 is always associated with high-level virulence in pigs. Strain SHO165 is a highly virulent serovar 5 strain was isolated from a Glaessers disease outbreak farm. It is predicted to have 6 phage islands, 9 intact toxin and antitoxin systems and a large number of transporter- associated genes. About 9% of the CDS are pseudogenes (modified from PubMed 15892739 and 19074396). (HAMAP: HAEPS) |
| Taxonomy | |
| Kingdom: | Bacteria |
| Phylum: | Proteobacteria |
| Class: | Gammaproteobacteria |
| Order: | Pasteurellales |
| Family: | Pasteurellaceae |
| Genus: | Haemophilus |
| Species: | parasuis |
| Strain | SH0165 |
| Complete | Yes |
| Sequencing centre | (07-JAN-2009) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (19-DEC-2008) Division of Animal Infectious Disease, State Key Laboratory of Agricultural Microorganism, College of |
| Sequencing quality | Level 6: Finished |
| Sequencing depth | NA |
| Sequencing method | Sanger, 454-GS-FLX |
| Isolation site | isolated from a Glasser's disease outbreak farm |
| Isolation country | China |
| Number of replicons | 1 |
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | No |
| Number of membranes | 2 |
| Oxygen requirements | Facultative |
| Optimal temperature | NA |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host name | Swine |
| Cell arrangement | NA |
| Sporulation | NA |
| Metabolism | NA |
| Energy source | NA |
| Diseases | Glasser's disease |
| Pathogenicity | NA |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis