Hydrogenobaculum sp. Y04AAS1
Names | Hydrogenobaculum sp. Y04AAS1 |
---|---|
Accession numbers | NC_011126 |
Background | Hydrogenobaculum sp. (strain Y04AAS1) is a terrestrial thermoacidophile chemolithoautotrophic bacterium isolated from Obsidian Pool, Yellowstone National Park, a terrestrial hot spring. It grows optimally at 58 degrees Celsius and pH 4, and acquires energy through the oxidation of hydrogen (??????knallgas?????? reaction) or reduced sulfur compounds. Like all Aquificaceae, Hydrogenobaculum sp. is able to fix CO2 using the ??????B-type?????? reductive tricarboxylic acid (TCA) cycle. It plays an important role in the biogeochemical cycling in these hot Springs. (modified from PubMed 16988757 and 19136599). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Aquificae |
Class: | Aquificae |
Order: | Aquificales |
Family: | Aquificaceae |
Genus: | Hydrogenobaculum |
Species: | Y04AAS1 |
Strain | Y04AAS1 |
Complete | Yes |
Sequencing centre | (05-AUG-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (07-AUG-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger |
Isolation site | "Obsidian Pool, Acidic hot spring in Yellowstone National Park" |
Isolation country | USA |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | No |
Flagellar presence | NA |
Number of membranes | 2 |
Oxygen requirements | Aerobic |
Optimal temperature | 58.0 |
Temperature range | Thermophilic |
Habitat | Aquatic |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | NA |
Citrate cycle (TCA cycle)
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation pathways in prokaryotes
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation pathways in prokaryotes
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis