Chlorobaculum parvum NCIB 8327
Names | Chlorobaculum parvum NCIB 8327 |
---|---|
Accession numbers | NC_011027 |
Background | Chlorobaculum parvum (formerly known as both Chlorobium vibrioforme subsp. thiosulfatophilum and Chlorobium limicola subsp. thiosulfatophilum) is a green sulfur bacteria. Grows as single, non-motile cells which are curved rods or vibrioid, approximately 1um wide. The photosynthetic pigments are BChl d with chlorobactene as the major carotenoid. Photoautotrophic growth occurs with sulfide, sulfur and thiosulfate as photosynthetic electron donors; molecular hydrogen may be used by some strains. In the presence of sulfide and bicarbonate, some simple organic compounds are photoassimilated. Vitamin B12 may be required for growth. Brackish water and marine bacteria that require at least 1% NaCl. This is the type strain (adapted from PubMed 12892110). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Chlorobi |
Class: | Chlorobia |
Order: | Chlorobiales |
Family: | Chlorobiaceae |
Genus: | Chlorobaculum |
Species: | parvum |
Strain | NCIB 8327 |
Complete | Yes |
Sequencing centre | (04-JUN-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (29-JUN-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | domestic sewage lagoon |
Isolation country | UK |
Number of replicons | 1 |
Gram staining properties | NA |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Facultative |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Aquatic |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Singles |
Sporulation | NA |
Metabolism | NA |
Energy source | Photolithotroph |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation pathways in prokaryotes
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation pathways in prokaryotes
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis