Chlorobium phaeobacteroides BS1

Names | Chlorobium phaeobacteroides BS1 |
---|---|
Accession numbers | NC_010831 |
Background | Chlorobium sp. strain BS1 is a green sulfur bacterium cultivated from the chemocline of the Black Sea. Cells are rod-shaped, immotile and brown-colored. This bacterium forms an extremely dilute, but detectable population in the Black Sea at a depth of about 100 m. The ecological situation of phototrophic organisms in the Black Sea chemocline is comparable to that of plants grown at a distance of 50 m from a little candle in an otherwise pitch black greenhouse. The cells produce chlorosomes that are two-fold larger than those of another Chlorobium phaeobacteroides strain (DSM 266, the type strain) to take advantage of this small amount of light (adapted from http://genome.jgi-psf.org/finished_microbes/chlpb/chlpb.home.html). (HAMAP: CHLPB) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Chlorobi |
Class: | Chlorobia |
Order: | Chlorobiales |
Family: | Chlorobiaceae |
Genus: | Chlorobium |
Species: | phaeobacteroides |
Strain | BS1 |
Complete | Yes |
Sequencing centre | (05-JUN-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (09-JUN-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger |
Isolation site | From the chemocline of the Black Sea |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Facultative |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Aquatic |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Chains, Singles |
Sporulation | Nonsporulating |
Metabolism | Nitrogen fixation |
Energy source | Photosynthetic |
Diseases | None |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation pathways in prokaryotes
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation pathways in prokaryotes
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis