Akkermansia muciniphila ATCC BAA-835
Names | Akkermansia muciniphila ATCC BAA-835 |
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Accession numbers | NC_010655 |
Background | Akkermansia muciniphila strain ATCC BAA-835 was isolated as a novel, strictly anaerobic, mucin-degrading bacterium from a healthy human fecal sample in anaerobic medium containing gastric mucin as the sole carbon and nitrogen source. Cells are oval-shaped, showing a different size depending on the medium, in mucin medium being 640 nm in diameter and 690 nm in length and rich medium being 830 nm in diameter and 1 um in length. Cells stained Gram-negative, while flagella were not seen on negatively stained electron micrograph preparations. Formation of spores by the strain was never observed. In mucin medium, the organism produced a capsule and could grow as single cells or in pairs, rarely in chains and often formed aggregates. It counts for 1-3% of cells in the human feces and is a normal component of the intestinal tract. (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Verrucomicrobia |
Class: | NA |
Order: | NA |
Family: | NA |
Genus: | NA |
Species: | NA |
Strain | ATCC BAA-835 |
Complete | Yes |
Sequencing centre | (01-MAY-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (07-MAY-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Human feces |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Cocci |
Mobility | No |
Flagellar presence | No |
Number of membranes | 2? |
Oxygen requirements | Anaerobic |
Optimal temperature | 37.0 |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | Free living |
Host name | Homo sapiens |
Cell arrangement | Pairs, Singles |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis