Bordetella avium 197N
Names | Bordetella avium 197N |
---|---|
Accession numbers | NC_010645 |
Background | Bordetella avium is a Gram-negative aerobic bacterium that causes bordetellosis in birds. Bordetella avium (strain 197N) is a spontaneous nalidixic acid-resistant derivative of virulent strain 197. Bordetella avium (strain 197N) was isolated from a diseased turkey in a commercial flock in the early 1980's. It was commonly thought to infect mostly commercially grown turkeys but it is also found in a variety of healthy wild and domesticated birds. Bordetellosis is highly contagious producing an upper respiratory tract infection that most often leads to death in chicks. The bacterium is easily transmitted by aerosols, leading to a rapid spread of the disease in facilities where birds are housed closely together. With 3417 predicted coding sequences, B.avium (strain 197N) has the smallest genome and gene complement of the sequenced bordetellae. Over 1100 genes present in B.avium but not in B.bronchiseptica were identified. It includes a unique fimbrial gene cluster, two hemagglutinins and their cognate secretion accessory proteins, a type II secretion system, an LPS biosynthesis locus, two separate loci potentially involved in the biosynthesis of an LPS O antigen, an operon that seems to encode enzymes for the synthesis of a cellulose-like polysaccharide and three prophages. There are 68 pseudogenes in B.avium. Bordetella avium appears to have a complete and intact set of motility and chemotaxis genes. Motility appears to be completely shut off above 40 degrees Celsius, which is close to the body temperatures of turkeys. (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Proteobacteria |
Class: | Betaproteobacteria |
Order: | Burkholderiales |
Family: | Alcaligenaceae |
Genus: | Bordetella |
Species: | avium |
Strain | 197N |
Complete | Yes |
Sequencing centre | (01-OCT-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (30-NOV-2005) Sebaihia M., Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Diseased turkey in a commercial flock, Ohio |
Isolation country | USA |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 2 |
Oxygen requirements | Aerobic |
Optimal temperature | 35.0 |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | Free living |
Host name | Turkey |
Cell arrangement | Chains, Pairs, Singles |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | Bordetellosis |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Taurine and hypotaurine metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Xylene degradation
Glyoxylate and dicarboxylate metabolism
Nitrotoluene degradation
Propanoate metabolism
Ethylbenzene degradation
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Taurine and hypotaurine metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Xylene degradation
Glyoxylate and dicarboxylate metabolism
Nitrotoluene degradation
Propanoate metabolism
Ethylbenzene degradation
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis