Nostoc punctiforme PCC 73102

Names | Nostoc punctiforme PCC 73102 |
---|---|
Accession numbers | NC_010628, NC_010629, NC_010630, NC_010631, NC_010632, NC_010633 |
Background | Nostoc punctiforme is a nitrogen-fixing cyanobacterium, growing autotrophically with CO2 as the carbon source, utilizing an oxygen-producing photosynthetic mechanism for the generation of ATP and reductant. The order Nostocales grow as unbranched filaments and produce up to three kinds of differentiated cells. Heterocysts differentiate in response to the lack of nitrogen in the environment and are the sites of nitrogen fixation (3-10% of total cells). Nostoc species also produce relatively short, motile filaments called hormogonia and spore-like structures termed akinetes in response to nutrient limitation other than nitrogen. Nostoc species are widely distributed in illuminated portions of the biosphere, including fresh waters and tropical, temperate and polar terrestrial systems; they are rarely found in marine habitats. Growth is often as a colony of filaments within a gelatinous matrix. Many Nostoc species occur in symbiotic associations with fungi to form lichens and with representatives of each of the major phylogenetic groups of plants. They are major contributors to the sequestration of CO2 in organic compounds, especially in nutrient poor and extreme environments.N. punctiforme strain ATCC 29133 (also known as PCC 73102) has a complex life cycle with differentiation of heterocysts, hormogonia and akinetes. The strain was isolated from symbiotic association with the gymnosperm cycad Macrozamia sp. N.punctiforme grows rapidly under completely dark heterotrophic conditions, with sucrose, glucose or fructose as the carbon source. In addition to its symbiotic and heterotrophic competence, it is amenable to genetic manipulation. It contains an insertion element which pops out under certain growth conditions. When it pops out gene Npun_R0414, the nitrogenase molybdenum-iron protein alpha chain NifD, is put together in one piece (adapted from http://genome.jgi-psf.org/finished_microbes/nospu/nospu.home.html). (HAMAP: NOSP7) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Cyanobacteria |
Class: | NA |
Order: | Nostocales |
Family: | Nostocaceae |
Genus: | Nostoc |
Species: | punctiforme |
Strain | PCC 73102 |
Complete | Yes |
Sequencing centre | (07-APR-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (25-APR-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger |
Isolation site | gymnosperm cycad Macrozamia sp |
Isolation country | NA |
Number of replicons | 6 |
Gram staining properties | Negative |
Shape | Filamentous |
Mobility | Yes |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Symbiotic |
Host name | NA |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | Carbon dioxide fixation Nitrogen fixation |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Ubiquinone and other terpenoid-quinone biosynthesis
Photosynthesis
Photosynthesis - antenna proteins
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Glycerolipid metabolism
Pyruvate metabolism
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation in photosynthetic organisms
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Carotenoid biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Ubiquinone and other terpenoid-quinone biosynthesis
Photosynthesis
Photosynthesis - antenna proteins
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Glycerolipid metabolism
Pyruvate metabolism
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation in photosynthetic organisms
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Carotenoid biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis