Francisella philomiragia subsp. philomiragia ATCC 25017
Names | Francisella philomiragia subsp. philomiragia ATCC 25017 |
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Accession numbers | NC_010331, NC_010336 |
Background | Francisella philomiragia, originally called Yersinia philomiragia, has been isolated from muskrats, river water, cod and humans. Based on 16S rRNA studies it was renamed F.philomiragia and split into 2 subspecies, philomiragia (for the mammalian isolates) and noatunensis (for the fish isolates). The type strain F.philomiragia subsp. philomiragia ATCC 25015 is non-motile and aerobic. F. philomiragia subsp. philomiragia ATCC 25017 was isolated from fresh water in the Bear River Migratory Bird Refuge, Utah, USA. (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Proteobacteria |
Class: | Gammaproteobacteria |
Order: | Thiotrichales |
Family: | Francisellaceae |
Genus: | Francisella |
Species: | philomiragia |
Strain | ATCC 25017 |
Complete | Yes |
Sequencing centre | (11-DEC-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (12-FEB-2008) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Water in the Bear River Refuge in Utah |
Isolation country | USA |
Number of replicons | 2 |
Gram staining properties | Negative |
Shape | Cocci |
Mobility | No |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | Homo sapiens |
Cell arrangement | Singles |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | Bacteremia, Pneumonia |
Pathogenicity | Rarely |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Taurine and hypotaurine metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Taurine and hypotaurine metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis