Mycobacterium bovis AF2122/97

Names | Mycobacterium bovis AF2122/97 |
---|---|
Accession numbers | NC_002945 |
Background | Mycobacterium bovis is a Gram positive non-spore forming, non-motile, slightly curved, aerobic, slow-growing bacterium. It is the causative agent of tuberculosis in cattle and other animals, including buffalo, lions and antelopes . The organism can also cause tuberculosis in humans.Its genome is 99.95 percent identical to that of M. tuberculosis. It is also part of the Mycobacterium complex which also includes M. tuberculosis and M. avium.Bovine Tuberculosis is a contagious, debilitating disease of both humans and animals. The primary site of infection is the lymph nodes, but it will spread to other organs such as the lungs as the disease progresses. Clinical signs of the disease include weakness, loss of appetite, weight loss and fever. Bovine TB is a chronic disease, and infected animals may take several years to develop clinical signs or may show no evidence of infection until they are sent to slaughter. Because the disease in cattle may not be clinically evident, even in advanced stages, diagnosis is often made upon post mortem examination at slaughter. Nodular lesions may be found in any organ or body cavity, but are usually seen in the lungs and associated lymph nodes of the head, respiratory and gastrointestinal tracts.The current vaccine against TB, the so-called BCG vaccine (short for 'Bacillus Calmette-Guerin') is not very effective. It is made from a live but weakened strain of Mycobacterium bovis. (From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Actinobacteria |
Class: | Actinobacteria |
Order: | Actinomycetales |
Family: | Mycobacteriaceae |
Genus: | Mycobacterium |
Species: | bovis |
Strain | AF2122/97 |
Complete | Yes |
Sequencing centre | (08-APR-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (24-MAR-2003) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (24-MAR-2003) Unite de Genetique Moleculaire Bacterienne Institut Pasteur, 28 rue du Docteur Roux, Paris Cedex 15 75724, |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger |
Isolation site | In 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes |
Isolation country | United Kingdom |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Aerobic |
Optimal temperature | 37.0 |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | Free living |
Host name | Cow, Homo sapiens |
Cell arrangement | Singles |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | Chemoorganotroph |
Diseases | Tuberculosis in cattle |
Pathogenicity | Yes |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Bisphenol degradation
Phenylalanine, tyrosine and tryptophan biosynthesis
Taurine and hypotaurine metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Chloroalkane and chloroalkene degradation
Naphthalene degradation
Propanoate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Limonene and pinene degradation
Sulfur metabolism
Caprolactam degradation
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Bisphenol degradation
Phenylalanine, tyrosine and tryptophan biosynthesis
Taurine and hypotaurine metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Chloroalkane and chloroalkene degradation
Naphthalene degradation
Propanoate metabolism
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Limonene and pinene degradation
Sulfur metabolism
Caprolactam degradation
Aminoacyl-tRNA biosynthesis