Clostridium beijerinckii NCIMB 8052
Names | Clostridium beijerinckii NCIMB 8052 |
---|---|
Accession numbers | NC_009617 |
Background | Clostridium beijerinckii species are ubiquitous in nature and routinely isolated from soil samples. C. beijerinckii NCIMB 8052 is a saccharolytic, strictly anaerobic, mesophyllic, motile, rod-shaped bacteria with oval, sub-terminal spores. It exhibits peritrichous flagella. During fermentation, it produces a number of products including acetate, butyrate, lactate, hydrogen gas, carbon dioxide, acetone, butanol, ethanol, acetoin and acetyl methyl carbonil. It is this capacity for solvent production (especially butanol, acetone, and isopropanol) that makes it biotechnologically interesting. It grows well and is easy to handle in simple, inexpensive media that is realistic for industrial use. The morphology of the cell changes over the growth cycle of the organism; at early exponential phase, the cells are long, filamentous and very motile. As the culture approaches the solventogenic stage, which corresponds with the stationary phase, cells shorten, become plumper and exhibit a lower level of motility (modified from http://genome.jgi-psf.org/finished_microbes/clobe/clobe.home.html). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Firmicutes |
Class: | Clostridia |
Order: | Clostridiales |
Family: | Clostridiaceae |
Genus: | Clostridium |
Species: | beijerinckii |
Strain | NCIMB 8052 |
Complete | Yes |
Sequencing centre | (06-JUN-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (29-JUN-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger |
Isolation site | plant-derived foodstuff (corn meal) |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 1 |
Oxygen requirements | Anaerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Fresh water, Soil |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Pairs, Singles |
Sporulation | Sporulating |
Metabolism | NA |
Energy source | Chemoorganotroph |
Diseases | None |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Pentose phosphate pathway
Pentose and glucuronate interconversions
Fructose and mannose metabolism
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Glycerolipid metabolism
Pyruvate metabolism
Butanoate metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Pentose phosphate pathway
Pentose and glucuronate interconversions
Fructose and mannose metabolism
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Glycerolipid metabolism
Pyruvate metabolism
Butanoate metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis