Thermosipho melanesiensis BI429
Names | Thermosipho melanesiensis BI429 |
---|---|
Accession numbers | NC_009616 |
Background | Thermosipho melanesiensis (strain BI429 / DSM 12029) is a Gram-negative, thermophilic, anaerobic rod-shaped bacterium. It occurs generally singly or in pair. It possesses an outer sheath-like structure characteristic of the order Thermotogales. It grows between 45 and 89 Celsius degrees with an optimum at 70 degrees. Its optimal pH is 6.5 and optimal salinity is 30 grams of NaCl per liter. The type strain BI429 / DSM 12029 was isolated from the gills of a deep-sea vent hydrothermal mussel, Bathymodiolus brevior from the Lau Basin in the Southwestern Pacific Ocean. As its minimal growth temperature is 45 degrees, it was dormant in the gills of B. brevior. (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Thermotogae |
Class: | Thermotogae |
Order: | Thermotogales |
Family: | Thermotogaceae |
Genus: | Thermosipho |
Species: | melanesiensis |
Strain | BI429 |
Complete | Yes |
Sequencing centre | (25-MAY-2007) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (29-JUN-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger, 454 |
Isolation site | "Gills of the deep-sea vent hydrothermal mussel Bathymodiolus brevior from the Lau Basin at Southwestern Pacific Ocean, between 1832 and 1887 metres (latitude, 22o329S; longitude, 176o439W)" |
Isolation country | Pacific Ocean |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 2 |
Oxygen requirements | Anaerobic |
Optimal temperature | 70.0 |
Temperature range | Thermophilic |
Habitat | HostAssociated |
Biotic relationship | Free living |
Host name | Bathymodiolus brevior |
Cell arrangement | Chains, Pairs, Singles |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis