Gramella forsetii KT0803
Names | Gramella forsetii KT0803 |
---|---|
Accession numbers | NC_008571 |
Background | Gramella forsetii (strain KT0803) is a marine aerobic heterotrophic representative of the bacterial phylum Bacteroides. It has been isolated from Noth Sea surface waters during a phytoplankton bloom. Its genome is made up of a single circular chromosome. The analysis of its predicted proteome reveals a combination of extensive glycolytic and proteolytic potential which, along with certain membrane transport characteristics, is consistant with the notion that Bacteroidetes are usually considered efficient utilizers of the biopolymers present in marine high molecular weight organic matter. Gramella forsetii possesses a gene encoding a potential deoxyhypusine synthase, a typically eukaryal and archaeal post-translational modification enzyme. (HAMAP: GRAFK) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Bacteroidetes |
Class: | Flavobacteria |
Order: | Flavobacteriales |
Family: | Flavobacteriaceae |
Genus: | Gramella |
Species: | forsetii |
Strain | KT0803 |
Complete | Yes |
Sequencing centre | (03-NOV-2006) Max Planck Institute for Molecular Genetics, proScience Ihnestrasse 73, D-14195 Berlin, Germany (10-JAN-2007) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Concentrated seawater collected from the German Bight in the North Sea |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid biosynthesis
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Bisphenol degradation
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Chloroalkane and chloroalkene degradation
Naphthalene degradation
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Limonene and pinene degradation
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Biosynthesis of unsaturated fatty acids
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid biosynthesis
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Bisphenol degradation
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Chloroalkane and chloroalkene degradation
Naphthalene degradation
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Limonene and pinene degradation
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Biosynthesis of unsaturated fatty acids