Lactobacillus casei ATCC 334
Names | Lactobacillus casei ATCC 334 |
---|---|
Accession numbers | NC_008502, NC_008526 |
Background | Lactobacilli are normal inhabitants of the gastrointestinal tract of man and animals where they are widely considered to exert a number of beneficial roles including immunomodulation, interference with enteric pathogens, and maintenance of a healthy intestinal microflora. Historically, probiotic roles have been ascribed primarily to Lactobacillus acidophilus. The genus Lactobacillus presently comprises more than 50 recognized species of non pathogenic bacteria which in addition to their probiotic effects are useful to human as indispensable agents for the fermentation of foods and feed. Like other lactic acid bacteria, L. casei are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative metabolism with lactic acid as the major metabolic end product. Within the genus Lactobacillus, L. casei form part of the facultatively heterofermentative species cluster, which produce lactic acid from hexose sugars via the Embden-Meyerhof pathway and from pentoses by the 6-phosphogluconate/phosphoketolase pathway. L. casei are a remarkably adaptive species, and may be isolated from raw and fermented dairy products, fresh and fermented plant products, and the reproductive and intestinal tracts of humans and other animals. Industrially, L. casei have application as human probiotics (health-promoting live culture), as acid-producing starter cultures for milk fermentation, and as specialty cultures for the intensification and acceleration of flavor development in certain bacterial-ripened cheese varieties (adapted from http://genome.jgi-psf.org/finished_microbes/lacca/lacca.home.html). (HAMAP: LACC3) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Firmicutes |
Class: | Bacilli |
Order: | Lactobacillales |
Family: | Lactobacillaceae |
Genus: | Lactobacillus |
Species: | casei |
Strain | ATCC 334 |
Complete | Yes |
Sequencing centre | (23-JUN-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (23-OCT-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | dairy products (Emmental cheese) |
Isolation country | NA |
Number of replicons | 2 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Facultative |
Optimal temperature | 30.0 |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | Homo sapiens |
Cell arrangement | Chains |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Selenocompound metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Thiamine metabolism
Pantothenate and CoA biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Selenocompound metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Thiamine metabolism
Pantothenate and CoA biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
NCBI Genomes
NC_008502NC_008526