Syntrophomonas wolfei subsp. wolfei str. Goettingen
| Names | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|---|
| Accession numbers | NC_008346 |
| Background | Syntrophomonas wolfei subsp. wolfei is an anaerobic bacterium that a-oxidizes short-chain saturated fatty acids, four to eight carbons in length, to acetate, propionate (from odd-numbered fatty acids), and H2 only when grown in coculture with H2-using bacteria such as methanogens. S.wolfei subsp. wolfei was the first syntroph found to grow on butyrate. (EBI Integr8) |
| Taxonomy | |
| Kingdom: | Bacteria |
| Phylum: | Firmicutes |
| Class: | NA |
| Order: | NA |
| Family: | NA |
| Genus: | NA |
| Species: | NA |
| Strain | Goettingen |
| Complete | Yes |
| Sequencing centre | (15-SEP-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (25-AUG-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA |
| Sequencing quality | Level 6: Finished |
| Sequencing depth | NA |
| Sequencing method | Sanger |
| Isolation site | Anaerobic digester sludge; Germany, Gottingen |
| Isolation country | Germany |
| Number of replicons | 1 |
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Oxygen requirements | Anaerobic |
| Optimal temperature | NA |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | NA |
| Host name | NA |
| Cell arrangement | Pairs, Singles |
| Sporulation | Nonsporulating |
| Metabolism | Fatty-acid-oxidizer |
| Energy source | NA |
| Diseases | NA |
| Pathogenicity | No |
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Purine metabolism
Pyrimidine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Peptidoglycan biosynthesis
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis