Nitrosomonas eutropha C91

Names | Nitrosomonas eutropha C91 |
---|---|
Accession numbers | NC_008341, NC_008342, NC_008344 |
Background | Nitrosomonas eutropha C91 is an autotrophic nitrifying bacterium. As a member of the ammonia-oxidizing bacteria, it catalyzes the oxidation of ammonia to meet its energy requirements for growth. This reaction is the first step in the oxidation of ammonia to nitrate which is an integral part of the biogeochemical N cycle and plays a central role in the availability of nitrogen to plants and hence in limiting CO2 fixation. Nitrifying bacteria also are important players in the treatment of industrial and sewage waste in the first step of oxidizing ammonia to nitrate. Evidence suggests that ammonia-oxidizing bacteria contribute significantly to the global production of nitrous oxide (produced by the reduction of nitrite). Nitrosomonas eutropha C91 (also known as strain Nm57; formerly ATCC 25984, which is no longer available) is a Gram-negative betaproteobacterium closely related to the better studied Nitrosomonas europaea. N. eutropha is an aerobic chemolithoautotroph deriving its carbon from CO2 and generating energy and reducing equivalents from the oxidation of ammonia to nitrite. It is pleomorphic (rod to pear-shaped) and is occasionally found in short chains. N. eutropha is commonly found in strongly eutrophic environments such as municipal and industrial sewage disposal systems and has a high tolerance for elevated ammonia concentrations. The cells are motile. The utilization of urea was not observed. Although N. eutropha is very similar to N. europaea, some notable differences exist. N. eutropha is able to grow anaerobically with H2 as the reductant and nitrite as the electron acceptor. However, the genomic sequence of N. europaea fails to give any indication supporting the presence of this ability. Additionally, unlike N. europaea , N. eutropha possesses carboxysomes. These differences suggest that significant differences in metabolic capability may exist between these related strains. (HAMAP: NITEC) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Proteobacteria |
Class: | Betaproteobacteria |
Order: | Nitrosomonadales |
Family: | Nitrosomonadaceae |
Genus: | Nitrosomonas |
Species: | eutropha |
Strain | C91 |
Complete | Yes |
Sequencing centre | (14-SEP-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (25-AUG-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | sewage disposal plant in Chicago, IL, USA |
Isolation country | USA |
Number of replicons | 3 |
Gram staining properties | Negative |
Shape | NA |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 2 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Chains, Singles |
Sporulation | NA |
Metabolism | Ammonia-oxidizer Nitrifying |
Energy source | Autotroph, Chemolithotroph |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Glutathione metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation in photosynthetic organisms
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Glutathione metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation in photosynthetic organisms
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis