Chlorobium chlorochromatii CaD3
Names | Chlorobium chlorochromatii CaD3 |
---|---|
Accession numbers | NC_007514 |
Background | Phototrophic consortia are structural associations between a colorless central bacterium and surrounding green- or brown-pigmented epibionts. To date, seven different morphotypes of motile, phototrophic consortia have been observed in freshwater lakes around the world. Such consortia can reach high concentrations in some environments, and are believed to represent important components of the carbon and sulfur cycles in freshwater environments. Chlorochromatium aggregatum is an aggregate consortium, made up of 2 types of bacteria. There is a colorless Betaproteobacterium in the center surrounded by 13 +/- 5 Chlorobium chlorochromatii CaD3, a green sulfur bacterium, which is the epibiont. (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Chlorobi |
Class: | Chlorobia |
Order: | Chlorobiales |
Family: | Chlorobiaceae |
Genus: | Chlorobium |
Species: | chlorochromatii |
Strain | CaD3 |
Complete | Yes |
Sequencing centre | (12-AUG-2005) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (27-OCT-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Isolated from a phototrophic consortia obtained from a freshwater lake in Germany. |
Isolation country | Germany |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Anaerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Aquatic |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Chains, Singles |
Sporulation | NA |
Metabolism | NA |
Energy source | Phototroph |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation pathways in prokaryotes
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation pathways in prokaryotes
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis