Anabaena variabilis ATCC 29413
Names | Anabaena variabilis ATCC 29413 |
---|---|
Accession numbers | NC_007410, NC_007411, NC_007412, NC_007413, NC_014000 |
Background | Anabaena variabilis ATCC 29413 is a filamentous heterocyst-forming cyanobacterium that fixes nitrogen and CO2 using the energy of sunlight via oxygen-evolving plant-type photosynthesis. It has also been studied extensively for the production of hydrogen using solar energy. It has a complex life cycle that includes different types of differentiated cells: heterocysts for nitrogen fixation, and akinetes (spores) for survival. It has been studied extensively for over 40 years and is the strain of choice for many laboratories throughout the world. (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Cyanobacteria |
Class: | NA |
Order: | Nostocales |
Family: | Nostocaceae |
Genus: | Anabaena |
Species: | variabilis |
Strain | ATCC 29413 |
Complete | Yes |
Sequencing centre | (12-SEP-2005) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (31-MAR-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger |
Isolation site | Freshwater; sewage oxidation pond |
Isolation country | USA |
Number of replicons | 5 |
Gram staining properties | Negative |
Shape | Filamentous |
Mobility | Yes |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Filaments, Singles |
Sporulation | NA |
Metabolism | Carbon dioxide fixation Hydrogen production Nitrogen fixation |
Energy source | Heterotroph |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Ubiquinone and other terpenoid-quinone biosynthesis
Photosynthesis
Photosynthesis - antenna proteins
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Glycerolipid metabolism
Pyruvate metabolism
Chloroalkane and chloroalkene degradation
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation in photosynthetic organisms
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Carotenoid biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Ubiquinone and other terpenoid-quinone biosynthesis
Photosynthesis
Photosynthesis - antenna proteins
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Glycerolipid metabolism
Pyruvate metabolism
Chloroalkane and chloroalkene degradation
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Carbon fixation in photosynthetic organisms
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Carotenoid biosynthesis
Aminoacyl-tRNA biosynthesis