Gluconobacter oxydans 621H
Names | Gluconobacter oxydans 621H |
---|---|
Accession numbers | NC_006672, NC_006673, NC_006674, NC_006675, NC_006676, NC_006677 |
Background | Gluconobacter oxydans 621H.Genome sequencing of Gluconobacter oxydans 621H (DSM 2343) has identified a number of membrane-bound dehydrogenases. The glucose/sorbitol dehydrogenase is responsible for the oxidation of D-sorbitol, gluconate and glycerol, producing L-sorbose, 5-ketogluconate and dihydroxyacetone, respectively. Other identified membrane-bound dehydrogenases include the alcohol, glucose, and sorbitol dehydrogenases, which are involved in acetate, gluconate, and D-fructose formation, respectively. In addition to the dehydrogenases with a recognized substrate, 75 putative dehydrogenase/oxidoreductases, 23 of which are thought to be membrane bound, have been identified in the genome sequence. Expression studies of G. oxydans grown on glucose has shown that a number of these uncharacterized oxidoreductases are transcribed and presumably have a role in cellular metabolism.The plasmids in G. oxydans strain 621H are not homologous to plasmids from other G. oxydans strains. Identified genes include those for plasmid replication, a DNA helicase II, a restriction/modification system, a heavy metal resistance system and, on the megaplasmid, genes for DNA transfer via conjugation. (NCBI BioProject: bp_list[1]) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Proteobacteria |
Class: | Alphaproteobacteria |
Order: | Rhodospirillales |
Family: | Acetobacteraceae |
Genus: | Gluconobacter |
Species: | oxydans |
Strain | 621H |
Complete | Yes |
Sequencing centre | (15-JUL-2004) Goettingen Genomics Laboratory, Georg-August-University Goettingen, Grisebachstr. 8, Goettingen (24-JAN-2005) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | NA |
Isolation country | NA |
Number of replicons | 6 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Aerobic |
Optimal temperature | 25.0 |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Singles |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Glutathione metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Glutathione metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis