Nocardia farcinica IFM 10152

Names | Nocardia farcinica IFM 10152 |
---|---|
Accession numbers | NC_006361, NC_006362, NC_006363 |
Background | Gram-positive, filamentous-growing soil saprophyte. It can cause the disease nocardiosis in humans: an acute, subacute, or chronic infectious disease occurring in cutaneous and pulmonary tissues, and also in the central nervous system.(From http://www.expasy.org/sprot/hamap/NOCFA.html) (BacMap) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Actinobacteria |
Class: | Actinobacteria |
Order: | Actinomycetales |
Family: | Nocardiaceae |
Genus: | Nocardia |
Species: | farcinica |
Strain | IFM 10152 |
Complete | Yes |
Sequencing centre | (11-OCT-2004) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (26-SEP-2003) Kitasato Institute for Life Sciences, Kitasato University, Kitasato 1-15-1, Sagamihara, Kanagawa |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Bronchus of a 68-year-old male Japanese patient |
Isolation country | Japan |
Number of replicons | 3 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | No |
Number of membranes | 1 |
Oxygen requirements | Aerobic |
Optimal temperature | 37.0 |
Temperature range | Mesophilic |
Habitat | Multiple |
Biotic relationship | Free living |
Host name | Homo sapiens |
Cell arrangement | Filaments |
Sporulation | Sporulating |
Metabolism | NA |
Energy source | NA |
Diseases | Nocardiosis |
Pathogenicity | Yes |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Tyrosine metabolism
Phenylalanine metabolism
Bisphenol degradation
Phenylalanine, tyrosine and tryptophan biosynthesis
Taurine and hypotaurine metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Xylene degradation
Toluene degradation
Chloroalkane and chloroalkene degradation
Naphthalene degradation
Propanoate metabolism
Styrene degradation
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Limonene and pinene degradation
Caprolactam degradation
Aminoacyl-tRNA biosynthesis
Biosynthesis of ansamycins
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Synthesis and degradation of ketone bodies
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Tyrosine metabolism
Phenylalanine metabolism
Bisphenol degradation
Phenylalanine, tyrosine and tryptophan biosynthesis
Taurine and hypotaurine metabolism
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Xylene degradation
Toluene degradation
Chloroalkane and chloroalkene degradation
Naphthalene degradation
Propanoate metabolism
Styrene degradation
Butanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Limonene and pinene degradation
Caprolactam degradation
Aminoacyl-tRNA biosynthesis
Biosynthesis of ansamycins