Haemophilus somnus 129PT

Names | Haemophilus somnus 129PT |
---|---|
Accession numbers | NC_006298, NC_008309 |
Background | Haemophilus somnus is the cause of a variety of systemic diseases in cattle, including thrombotic-meningoencephalitis, pneumonia, abortion and other reproductive diseases, arthritis, myocarditis, and septicemia. Diseases due to H. somnus account for millions of dollars in losses to the cattle industry, and are particularly prevalent in feedlots; additionally this agent may also affect dairy cattle. It may be the most economically important pathogen of feedlot cattle. H.somnus 129Pt is an avirulent commensal strain. Extensive comparisons between 3 available Haemophilus were performed (H.somnus 129Pt, H.influenzae Rd and H.ducreyi 35000HP). It encodes the shikimate pathway for chorismate biosynthesis and all components of the ubiquinone and menaquinone synthesis pathways, as well as genes involved in lipooligosaccharide biosynthesis, carbohydrate uptake and metabolism, cation transport, amino acid metabolism and so on, that may be important to its ecological niche. (HAMAP: HAES1) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Proteobacteria |
Class: | Gammaproteobacteria |
Order: | Pasteurellales |
Family: | Pasteurellaceae |
Genus: | Histophilus |
Species: | somni |
Strain | 129PT |
Complete | Yes |
Sequencing centre | (07-AUG-2006) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA (30-AUG-2006) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | NA |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | NA |
Isolation country | NA |
Number of replicons | 2 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | No |
Flagellar presence | No |
Number of membranes | 2 |
Oxygen requirements | Facultative |
Optimal temperature | 35.0 |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | NA |
Host name | NA |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | Pneumonia, arthritis, myocarditis, and reproductive problems |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Pentose and glucuronate interconversions
Fructose and mannose metabolism
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Pentose and glucuronate interconversions
Fructose and mannose metabolism
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis