Photorhabdus luminescens subsp. laumondii TTO1
Names | Photorhabdus luminescens subsp. laumondii TTO1 |
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Accession numbers | NC_005126 |
Background | Photorhabdus luminescens is a gram-negative gamma proteobacterium belonging to the family Enterobacteriaceae. It is symbiotic with soil entomopathogenic nematodes of the family Heterorhabditidae and pathogenic to a wide range of insects.P. luminescens promotes its own transmission among susceptible insect populations using its nematode host. Upon invasion of the host the bacteria are released directly into the open blood system of the insect. Its life cycle comprises a symbiotic stage in the nematode's gut and a virulent stage in the insect larvae, which it kills through toxemia and septicemia.After the nematode attacks a prey insect and P. luminescens is released, the bacterium produces a wide variety of virulence factors ensuring rapid insect killing. Bioconversion of the insect cadaver by exoenzymes produced by the bacteria allow the it to multiply and the nematode to reproduce. During this process P. luminescens produces antibiotics to prevent invasion of the insect cadaver by bacterial or fungal competitors and the carcass becomes visibly luminescent due to the bioluminescence of P. luminescens.Once the infection is established, the insect cadaver is bioconverted into a source of nutrients for both the bacteria and the nematodes. Infective juvenile nematodes subsequently re-acquire the bacteria and leave the insect to infect new hosts.Iron acquisition seems to be of particular importance for the life cycle of P. luminescens, as this bacterium has the largest known set of iron, heme, hemin and siderophore transporters. Within an insect, P. luminescens needs to get access to the available nutrients and has to deal with low-iron conditions.P. luminescens has also been found as an opportunistic pathogen in human wounds. It was suspected of causing wounds of some Civil War combatants to glow, thus providing a curative effect against infections caused by other microbes.Now that the complete genome has been sequenced, the next challenge is to identify genes involved in symbiosis that could be used to increase the production of the worms for the biological control of insects. In tests Photorhabdus luminescens reduced Colorado potato beetles by 100 percent in lab conditions. The potato beetle is notorious for developing resistance to insecticides, so scientists are seeking non-chemical controls as possible natural insecticides.Strain TT01 possesses a single circular chromosome of 5,688,987 bp with an average GC content of 42.8% and has the largest genome of its class, including E. coli.(From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Proteobacteria |
Class: | Gammaproteobacteria |
Order: | Enterobacteriales |
Family: | Enterobacteriaceae |
Genus: | Photorhabdus |
Species: | luminescens |
Strain | TTO1 |
Complete | Yes |
Sequencing centre | (06-OCT-2003) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (23-APR-2003) Genopole, Institut Pasteur, 25 rue du Docteur Roux, Paris Cedex 15 75724, France |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Sanger |
Isolation site | Isolated from the nematode Heterorhabditis bacteriophora on Trinidad and Tobago |
Isolation country | Tobago |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 2 |
Oxygen requirements | Facultative |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | Symbiotic |
Host name | Heterorhabditis bacteriophora |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | Toxemia and septicemia |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Glutathione metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Glycerophospholipid metabolism
alpha-Linolenic acid metabolism
Pyruvate metabolism
Glyoxylate and dicarboxylate metabolism
Propanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Fatty acid metabolism
Ubiquinone and other terpenoid-quinone biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine degradation
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Glutathione metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Glycerophospholipid metabolism
alpha-Linolenic acid metabolism
Pyruvate metabolism
Glyoxylate and dicarboxylate metabolism
Propanoate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Lipoic acid metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis