Wolinella succinogenes DSM 1740
Names | Wolinella succinogenes DSM 1740 |
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Accession numbers | NC_005090 |
Background | W. succinogenes is a nonfermenting bacterium that grows anaerobic respiration and has been reported to grow in the presence of 2% oxygen). The darting motility of W. succinogenes has triggered several projects that investigated the unique aspects of its monotrichous flagellation and the insertion of the flagellar motor into the pole of the cell. W. succinogenes has been isolated from the bovine rumen, the human gingival sulcus, and dental root canal infections.To understand the origin and emergence of pathogenic bacteria, comparison to their nonpathogenic relatives is a necessary. Therefore, the 2.11-megabase genome sequence of Wolinella succinogenes, which is closely related to the pathogenic bacteria Helicobacter pylori and Campylobacter jejuni, has been sequenced. Despite being considered nonpathogenic to its bovine host, W. succinogenes holds an extensive repertoire of genes homologous to known bacterial virulence factors. Many of these genes have been acquired by lateral gene transfer.In contrast to other host-adapted bacteria, W. succinogenes does contain the highest density of bacterial sensor kinases found in any bacterial genome to date, together with an elaborate signalling circuitry of the GGDEF family of proteins. Because the analysis of the W. succinogenes genome also revealed genes related to soil and plant associated bacteria such as the nif genes, W. succinogenes may represent a member of the epsilon proteobacteria with a life cycle outside its host.(From http://www.ebi.ac.uk/2can/genomes/bacteria.html) (BacMap) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Proteobacteria |
Class: | Epsilonproteobacteria |
Order: | Campylobacterales |
Family: | Helicobacteraceae |
Genus: | Wolinella |
Species: | succinogenes |
Strain | DSM 1740 |
Complete | Yes |
Sequencing centre | (10-SEP-2003) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (15-MAY-2003) Max-Plank Institut for Developmental Biology, Spemannstr. 35, Tuebingen 72076, Germany |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Bovine rumen fluid |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Spirilla |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 2 |
Oxygen requirements | Microaerophilic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | Free living |
Host name | Cow |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Citrate cycle (TCA cycle)
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Nitrogen metabolism
Sulfur metabolism
Aminoacyl-tRNA biosynthesis