Treponema brennaborense DSM 12168
Names | Treponema brennaborense DSM 12168 |
---|---|
Accession numbers | NC_015500 |
Background | This strain is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1]) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Spirochaetes |
Class: | Spirochaetes |
Order: | Spirochaetales |
Family: | Spirochaetaceae |
Genus: | Treponema |
Species: | brennaborense |
Strain | DSM 12168 |
Complete | Yes |
Sequencing centre | (05-MAY-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (26-APR-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Illumina, 454-GS-FLX-Titanium, 454-Paired-end |
Isolation site | Ulcerative lesion of a bovine foot infected with digital dermatitis |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | NA |
Mobility | Yes |
Flagellar presence | NA |
Number of membranes | NA |
Oxygen requirements | Anaerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | HostAssociated |
Biotic relationship | Free living |
Host name | Bovine |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | NA |
Glycolysis / Gluconeogenesis
Pentose phosphate pathway
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
One carbon pool by folate
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Pentose phosphate pathway
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Amino sugar and nucleotide sugar metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
One carbon pool by folate
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis