Candidatus Pelagibacter sp. IMCC9063
Names | Candidatus Pelagibacter sp. IMCC9063 |
---|---|
Accession numbers | NC_015380 |
Background | Genomic DNA from Strain IMCC9063 from SAR11 group 3 isolated from an Arctic Envirionment. (NCBI BioProject: bp_list[1]) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Proteobacteria |
Class: | Alphaproteobacteria |
Order: | Rickettsiales |
Family: | NA |
Genus: | Candidatus Pelagibacter |
Species: | IMCC9063 |
Strain | IMCC9063 |
Complete | Yes |
Sequencing centre | (03-FEB-2011) Division of Biology and Ocean Sciences, College of Natural Sciences, Inha University, Incheon 402-751, (07-APR-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | 454-GS-FLX-Titanium |
Isolation site | surface seawater sample collected off the coastal region near the Dasan Korean Arctic Station in Ny-lesund Svalbard, Norway |
Isolation country | Norway |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | NA |
Flagellar presence | NA |
Number of membranes | NA |
Oxygen requirements | Aerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Marine |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | NA |
Citrate cycle (TCA cycle)
Synthesis and degradation of ketone bodies
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Synthesis and degradation of ketone bodies
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis