Thermoanaerobacter brockii subsp. finnii Ako-1
Names | Thermoanaerobacter brockii subsp. finnii Ako-1 |
---|---|
Accession numbers | NC_014964 |
Background | Rising global demand for energy coupled with recent supply-side instability in the petroleum market have prompted renewed calls for the development of alternative fuel sources to reduce America's dependence on foreign oil. One such alternative, bioproduced ethanol derived from cellulosic plant materials is a primary alternative for immediate and long-term replacement of fossil fuels. Clostridia are chosen for their proven ability to degrade complex cellulosic polymers, to ferment a variety of cellulosic degradation byproducts to ethanol and to produce beneficial industrial compounds in addition to ethanol. Thermoanaerobacter brockii subsp. finnii (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) is an anaerobic Gram-positive bacterium isolated from lake sediment sludge in Africa. It is an efficient producer of ethanol from xylose. Ethanol is the major end product of fermentation from glucose and xylose, but switches to acetate under thiosulfate-respiring conditions. Respiration of thiosulfate is accompanied by increased growth rates and yields, suggesting an increased rate of substrate-level phosphorylation. In addition, thiosulfate reduction can be linked to H2 oxidation which serves to alleviate the toxic effects of H2 concentrations. As such, thiosulfate- reducing species may play a significant role in carbon flux in sulfidogenic environments. (Adapted from: http://genome.jgi-psf.org/thebr/thebr.home.html). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Firmicutes |
Class: | Clostridia |
Order: | Thermoanaerobacterales |
Family: | Thermoanaerobacteraceae |
Genus: | Thermoanaerobacter |
Species: | brockii |
Strain | Ako-1 |
Complete | Yes |
Sequencing centre | (14-JAN-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA (25-JAN-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Lake sediment; Africa, Lake Kivu |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 1 |
Oxygen requirements | Anaerobic |
Optimal temperature | 65.0 |
Temperature range | Thermophilic |
Habitat | Aquatic |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | Pairs, Singles |
Sporulation | Nonsporulating |
Metabolism | Saccharolytic |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Pantothenate and CoA biosynthesis
Lipoic acid metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis