Thermovibrio ammonificans HB-1
Names | Thermovibrio ammonificans HB-1 |
---|---|
Accession numbers | NC_014917, NC_014926 |
Background | Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) is a thermophilic, anaerobic, chemolithoautotrophic, Gram-negative bacterium isolated from the walls of an active deep-sea hydrothermal vent chimney on the east Pacific rise. This organism grows on mineral salts in the presence of carbon dioxide and hydrogen, reducing nitrate or sulfur to ammonium or hydrogen sulfide, respectively. The characterization of T. ammonificans is critical to understand the ecology and biogeochemistry of geothermal environments. (Adapted from: http://www.ncbi.nlm.nih.gov/genomeprj/49403). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Aquificae |
Class: | Aquificae |
Order: | Aquificales |
Family: | Desulfurobacteriaceae |
Genus: | Thermovibrio |
Species: | ammonificans |
Strain | HB-1 |
Complete | Yes |
Sequencing centre | (03-JAN-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA (13-JAN-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Walls of an active deep-sea hydrothermal vent chimney on the East Pacific Rise at 9 degrees 50'N |
Isolation country | NA |
Number of replicons | 2 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 2 |
Oxygen requirements | Anaerobic |
Optimal temperature | 75.0 |
Temperature range | Thermophilic |
Habitat | Deep sea, Fresh water, Hydrothermal vent, Marine |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | Chemolithoautotroph |
Diseases | NA |
Pathogenicity | No |
Citrate cycle (TCA cycle)
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis