Desulfurispirillum indicum S5

Names | Desulfurispirillum indicum S5 |
---|---|
Accession numbers | NC_014836 |
Background | Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) is a selenate-reducing Gram-negative bacterium. It is able to reduce selenate to selenite and further to insoluble elemental selenium, in a process called dissimilatory selenate reduction. The biogeochemical cycling of selenium in the environment is predominantly governed by microorganisms, which play an important role in oxidation, reduction, methylation and volatilization. Knowledge of how this process of speciation takes place is relevant to studies aimed to develop processes for removal of selenium from polluted soils, and therefore relevant to environmental science and toxicology studies. Studies of the microbial speciation of the metalloids selenium and arsenic are also fundamental to the elucidation of how their role as terminal electron acceptors currently affects geochemical cycles and to what extent this has contributed to determine the chemical composition of Earth. (Adapted from: http://genome.jgi-psf.org/selin/selin.home.html). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Chrysiogenetes |
Class: | NA |
Order: | NA |
Family: | NA |
Genus: | NA |
Species: | NA |
Strain | S5 |
Complete | Yes |
Sequencing centre | (05-JAN-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA (30-DEC-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | 454-GS-FLX-Titanium, Illumina GAii |
Isolation site | River sediment; India, Chennai, Buckingham Canal, Chepauk |
Isolation country | India |
Number of replicons | 1 |
Gram staining properties | Negative |
Shape | Spirilla |
Mobility | Yes |
Flagellar presence | Yes |
Number of membranes | 2 |
Oxygen requirements | Anaerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Fresh water, Sediment |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | Selenate reducer |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Citrate cycle (TCA cycle)
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
Nitrotoluene degradation
C5-Branched dibasic acid metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Biotin metabolism
Folate biosynthesis
Porphyrin and chlorophyll metabolism
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis