Ethanoligenens harbinense YUAN-3
Names | Ethanoligenens harbinense YUAN-3 |
---|---|
Accession numbers | NC_014828 |
Background | Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) is a strictly anaerobic, motile, chemo-organotrophic Gram-positive bacterium isolated from anaerobic activated sludge of molasses wastewater in a continuous stirred-tank reactor. Cells are regular rods and occur singly, in pairs and sometimes in chains of up to eight. Autoaggregative and autofluorescent growth is observed at 20-44 degrees Celsius and at pH between 3.5-9.0, with optimum growth at 35 degrees Celsius and approximately at pH 4.5-5-0. It is able to grow in the presence of 0-2% (w/v) NaCl. E. harbinense hydrolyses gelatin and aesculin and fermented several kinds of mono-, di- and oligosaccharides. Fermentation end products formed from glucose are acetate, ethanol, hydrogen and carbon dioxide. (Adapted from PMID: 16585689). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Firmicutes |
Class: | Clostridia |
Order: | Clostridiales |
Family: | Ruminococcaceae |
Genus: | Ethanoligenens |
Species: | harbinense |
Strain | YUAN-3 |
Complete | Yes |
Sequencing centre | (16-DEC-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA (29-DEC-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | NA |
Isolation site | Anaerobic activated sludge of molasses wastewater in a continuous stirred-tank reactor |
Isolation country | NA |
Number of replicons | 1 |
Gram staining properties | Positive |
Shape | Bacilli |
Mobility | No |
Flagellar presence | Yes |
Number of membranes | 1 |
Oxygen requirements | Anaerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Sludge |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | Nonsporulating |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Pentose phosphate pathway
Fructose and mannose metabolism
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis
Pentose phosphate pathway
Fructose and mannose metabolism
Galactose metabolism
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Cysteine and methionine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Alanine metabolism
Starch and sucrose metabolism
Streptomycin biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
One carbon pool by folate
Thiamine metabolism
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Folate biosynthesis
Terpenoid backbone biosynthesis
Aminoacyl-tRNA biosynthesis