Ketogulonicigenium vulgare Y25
Names | Ketogulonicigenium vulgare Y25 |
---|---|
Accession numbers | NC_014621, NC_014625, NC_014626 |
Background | Ketogulonicigenium vulgare (strain Y25) is a facultative anaerobic, non-motile Gram-negative bacterium isolated from soil. It has ovoid to rod-shaped cells. The optimum temperature range is between 27-29 degrees Celsius. K.vulgare is able to oxidize L-sorbose to 2-keto-L-gulonic acid (in mixed culture fermentation with Bacillus species 8), a key intermediate in the synthesis of vitamin C. Four genes encoding sorbose dehydrogenase are found in the chromosome, and every one could transform L-sorbose into 2-keto-gulonic acid and required pyrroloquinoline quinine for the prosthetic groups in vitro. K.vulgare is known as a 2-keto-L-gulonic acid producing strain from sorbose in vitamin C industry. (Adapted from PMID: 21037005). (EBI Integr8) |
Taxonomy | |
Kingdom: | Bacteria |
Phylum: | Proteobacteria |
Class: | Alphaproteobacteria |
Order: | Rhodobacterales |
Family: | Rhodobacteraceae |
Genus: | Ketogulonicigenium |
Species: | vulgare |
Strain | Y25 |
Complete | Yes |
Sequencing centre | (17-SEP-2010) Beijing Institute of Biotechnology, Dongdajie 20, Fengtai District, Beijing, Beijing 100071, China (22-OCT-2010) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA |
Sequencing quality | Level 6: Finished |
Sequencing depth | NA |
Sequencing method | Illumina |
Isolation site | soil |
Isolation country | NA |
Number of replicons | 3 |
Gram staining properties | Negative |
Shape | Bacilli |
Mobility | No |
Flagellar presence | Yes |
Number of membranes | 2 |
Oxygen requirements | Anaerobic |
Optimal temperature | NA |
Temperature range | Mesophilic |
Habitat | Terrestrial |
Biotic relationship | Free living |
Host name | NA |
Cell arrangement | NA |
Sporulation | NA |
Metabolism | NA |
Energy source | NA |
Diseases | NA |
Pathogenicity | No |
Glycolysis / Gluconeogenesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis
Citrate cycle (TCA cycle)
Pentose phosphate pathway
Purine metabolism
Pyrimidine metabolism
Alanine, aspartate and glutamate metabolism
Glycine, serine and threonine metabolism
Valine, leucine and isoleucine biosynthesis
Lysine biosynthesis
Arginine and proline metabolism
Histidine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Selenocompound metabolism
D-Glutamine and D-glutamate metabolism
D-Arginine and D-ornithine metabolism
D-Alanine metabolism
Streptomycin biosynthesis
Lipopolysaccharide biosynthesis
Peptidoglycan biosynthesis
Pyruvate metabolism
C5-Branched dibasic acid metabolism
One carbon pool by folate
Riboflavin metabolism
Vitamin B6 metabolism
Nicotinate and nicotinamide metabolism
Pantothenate and CoA biosynthesis
Terpenoid backbone biosynthesis
Sulfur metabolism
Aminoacyl-tRNA biosynthesis